aboutsummaryrefslogtreecommitdiff
path: root/gn3/api
AgeCommit message (Expand)Author
2023-03-01Fetch sampledataMunyoki Kilyungi
2023-03-01Create API endpoint for fetching trait metadataMunyoki Kilyungi
2023-01-24search: Use decimals, not floats, when converting to megabases.Arun Isaac
2023-01-24search: Support SI suffixes and point locations.Arun Isaac
2023-01-24search: Abstract out parsing of position spec into separate function.Arun Isaac
2023-01-24search: Alias the position prefix with pos.Arun Isaac
2023-01-24search: Rename the mb prefix to position.Arun Isaac
2023-01-24search: Assume triplets mean synteny is requested.Arun Isaac
2023-01-24search: Use comprehension when splitting location.Arun Isaac
2023-01-20mypy: minor fixes to typing errorsFrederick Muriuki Muriithi
2023-01-19search: Downcase before applying SI suffix.Arun Isaac
2023-01-19search: Use decimals, not floats, to manipulate range limits.Arun Isaac
2023-01-19search: Only look for SI suffix in the last character.Arun Isaac
2023-01-19search: Apply SI suffix only if last character is an actual suffix.Arun Isaac
2023-01-18search: Ensure limits of chromosomal interval is non-negative.Arun Isaac
2023-01-18search: Convert point locations to a +/- 50 kbase range.Arun Isaac
2023-01-18Pass species and species prefix as a single query argument.Arun Isaac
2023-01-18auth: Fix tests after enforcing FOREIGN KEY constraintFrederick Muriuki Muriithi
2023-01-18Tolerate WEIGHT operator in parsed search queries.Arun Isaac
2023-01-18Implement synteny search.Arun Isaac
2023-01-18Support location shorthands in search queries.Arun Isaac
2023-01-18Split off search query parsing into separate function.Arun Isaac
2022-12-06Use a dataset's name to fetch it's metadata from RDFMunyoki Kilyungi
2022-11-28Catch a URLError when virtuoso isn't running at allMunyoki Kilyungi
2022-11-28Fix pylint errorsMunyoki Kilyungi
2022-11-28Fail gracefully when virtuoso is not accessibleMunyoki Kilyungi
2022-11-23Create a new REST endpoint for fetching a phenotype's metadataMunyoki Kilyungi
2022-11-02Re-implement RDF related code to use monads in its own moduleMunyoki Kilyungi
2022-10-28Use Xapian index path from app settings.Arun Isaac
2022-10-28Add search.Arun Isaac
2022-07-28Add command to run the sample correlations in an external processFrederick Muriuki Muriithi
2022-05-26Add Endpoint to get menu items for use in UIFrederick Muriuki Muriithi
2022-05-24Run partial correlations with external scriptFrederick Muriuki Muriithi
2022-05-24New script to compute partial correlationsFrederick Muriuki Muriithi
2022-05-21Fix linting errorsFrederick Muriuki Muriithi
2022-05-16Run computation in one-shot asynchronous processFrederick Muriuki Muriithi
2022-05-06Fix linting and typing errorsFrederick Muriuki Muriithi
2022-05-06Hook up pcorrs with target traits computationsFrederick Muriuki Muriithi
2022-03-30Revert "Run json.loads on request.get_json, since request.get_json was just r...Frederick Muriuki Muriithi
2022-03-28Run json.loads on request.get_json, since request.get_json was just returning...zsloan
2022-03-22Fixes pylint errorszsloan
2022-03-22Fix issue that causes R/qtl to always run pair-scan even if pair-scan isn't s...zsloan
2022-03-22Added genofile name to inputs for processing R/qtl pair-scan results, since i...zsloan
2022-03-22Fix imports to import both process_rqtl_mapping and process_rqtl_pairscan in ...zsloan
2022-03-22Added pairscan boolean kwarg and process_rqtl_pairscan function for reading i...zsloan
2022-03-11Fix some linting issuesFrederick Muriuki Muriithi
2022-03-08Fix tests, and issues caught by testsFrederick Muriuki Muriithi
2022-03-08Create database connections within context managersFrederick Muriuki Muriithi
2022-03-04Automatically decode Redis stringsFrederick Muriuki Muriithi
2022-03-03Add endpoint for checking state of external processesFrederick Muriuki Muriithi
generated by cgit v1.2.3 (git 2.44.0) at 2024-12-11 10:26:04 +0000