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2024-02-13Fetch extra metadata from text-files when fetching datasets.Munyoki Kilyungi
2024-02-13Update "dataset/<name>" API endpoint to fetch metadata from files.Munyoki Kilyungi
2024-02-13Retrieve metadata from text files given a path.Munyoki Kilyungi
2024-02-12pep8 formattingAlexander_Kabui
2024-01-30Add the traceback to the exceptions for display.Frederick Muriuki Muriithi
2024-01-26centralize common errorsAlexander_Kabui
2024-01-26Feature/gn llm caching (#148)Alexander Kabui
2024-01-17fix error message for empty responsesAlexander_Kabui
2024-01-17Adjust retry parameters and response handling in custom_requestAlexander_Kabui
2024-01-17Increase timeout to 30s to fix 'Read timed out issueAlexander_Kabui
2024-01-17Enhance error response message in API endpointAlexander_Kabui
2024-01-17max no of retries for user to fahamu apiAlexander_Kabui
2024-01-17fix pylint errorsAlexander_Kabui
2024-01-17temp fix:disable pylint checkAlexander_Kabui
2024-01-17Refactor llms.process: Rename getGNQA to get_gnqaAlexander_Kabui
2024-01-17Feature/gn llm refactoring (#147)Alexander Kabui
2024-01-16add api endpoint for rating reference documents (#146)Alexander Kabui
2024-01-10Add extra pylint rule to except files that are too long.Munyoki Kilyungi
2024-01-10Optionally fetch dataset metadata if provided during genotype fetch.Munyoki Kilyungi
2024-01-10Switch to gnt:belongsToSpecies in genotype queries.Munyoki Kilyungi
2024-01-10Remove hard-coded dataset name.Munyoki Kilyungi
2024-01-08merge for latest commitsAlexander_Kabui
2024-01-08fix query formatting and increase no retriesAlexander_Kabui
2024-01-08Optionally fetch dataset metadata if provided during probeset fetch.Munyoki Kilyungi
2024-01-08add json file for all referencesAlexander_Kabui
2024-01-08Update retry parameters for custom requests to Fahamu AI endpoint.Munyoki Kilyungi
2024-01-08disable process waitAlexander_Kabui
2024-01-06Remove extra gene metadata from query as it's un-necessary.Munyoki Kilyungi
2024-01-06Add extra keys to the Probeset's json-ld context.Munyoki Kilyungi
2024-01-06Refactor gene symbol handling and add references to probeset.Munyoki Kilyungi
2024-01-06Use gnt:geneSymbol property to fetch genes in Probeset RDF query.Munyoki Kilyungi
2024-01-05http request header fixesAlexander_Kabui
2024-01-05max delay timeAlexander_Kabui
2024-01-05increase number of retriesAlexander_Kabui
2024-01-03fix fetch token error from curent appAlexander_Kabui
2024-01-03pylint fixesAlexander_Kabui
2024-01-03fetch auth token from current appAlexander_Kabui
2024-01-03load gn3 secret fileAlexander_Kabui
2024-01-03Delete obsolete Guix system definition.Arun Isaac
2024-01-03Do not log user information.Arun Isaac
2023-12-29handle exception for request errorAlexander_Kabui
2023-12-29fix mypy issuesAlexander_Kabui
2023-12-22Feature/gn llms (#140)Alexander Kabui
2023-12-22setup.py: Find packages automatically using find_packages.Arun Isaac
2023-12-19README: Replace pylint and mypy CI badges with all-tests CI badge.Arun Isaac
2023-12-19guix: Add genenetwork3-all-tests.Arun Isaac
2023-12-15Update RDF ProbeSet query.Munyoki Kilyungi
2023-12-15First frame and then compact probeset results.Munyoki Kilyungi
2023-12-15Update ProbeSet's context.Munyoki Kilyungi
2023-12-15Update BASE_CONTEXT entries.Munyoki Kilyungi