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AgeCommit message (Expand)Author
2023-10-30Use correct upstream guix-bioinformatics channel.Munyoki Kilyungi
2023-10-28Revert "Roll back to python 3.9 in .guix-channel"Arun Isaac
2023-10-27Trigger CI build.Munyoki Kilyungi
2023-10-27Add pyld to setup.py file.Munyoki Kilyungi
2023-10-27Refactor to use new rdf.query_* abstractions.Munyoki Kilyungi
2023-10-27Fix pylint error.Munyoki Kilyungi
2023-10-27Refactor to use new rdf.query_* abstractions.Munyoki Kilyungi
2023-10-27Add functions that wrap around the common jsonld patterns.Munyoki Kilyungi
2023-10-27Break up long line.Munyoki Kilyungi
2023-10-27Remove reimport "Optional".Munyoki Kilyungi
2023-10-27Make scripts/ a module since it referenced in argparse_actions.py.Munyoki Kilyungi
2023-10-27Ignore construct result for mypy complianceMunyoki Kilyungi
2023-10-27Make implicit optional type hints PEP 484 compliant.Munyoki Kilyungi
2023-10-27Abstract out (sparql) CONSTRUCT into a function.Munyoki Kilyungi
2023-10-27Delete unused imports.Munyoki Kilyungi
2023-10-27Remove duplicate key in dictionary.Munyoki Kilyungi
2023-10-27Implement "GET /metadata/probesets/:name".Munyoki Kilyungi
2023-10-27Delete duplicate function.Munyoki Kilyungi
2023-10-27Implement "GET /metadata/groups/:name".Munyoki Kilyungi
2023-10-27Implement "GET /metadata/group".Munyoki Kilyungi
2023-10-27Implement "GET /metadata/species/:name".Munyoki Kilyungi
2023-10-27Implement "GET /metadata/species".Munyoki Kilyungi
2023-10-27Implement "GET /metadata/genewikis/ncbi/:symbol".Munyoki Kilyungi
2023-10-27Implement "GET /metadata/genewikis/gn/:symbol".Munyoki Kilyungi
2023-10-27Implement "GET /metadata/genotypes/:name".Munyoki Kilyungi
2023-10-27Add missing prefixes.Munyoki Kilyungi
2023-10-27Rename "limit" query paramater to "per-page".Munyoki Kilyungi
2023-10-27Remove un-necessary prefixes when fetching NCBI genewiki entries.Munyoki Kilyungi
2023-10-27Remove un-necessary prefixes when fetching gn genewiki entries.Munyoki Kilyungi
2023-10-27Implement "GET /phenotype/:group/:name".Munyoki Kilyungi
2023-10-27Remove un-necessary prefixes when fetching a phenotype.Munyoki Kilyungi
2023-10-27Remove un-necessary prefixes when searching publications.Munyoki Kilyungi
2023-10-27Use virtuoso's full text search when searching datasets.Munyoki Kilyungi
2023-10-27REmove un-necessary prefixes when searching datasets.Munyoki Kilyungi
2023-10-27Implement "GET /metadata/datasets/:group/list".Munyoki Kilyungi
2023-10-27Support using AccessionId to fetch datasets.Munyoki Kilyungi
2023-10-27Remove PREFIXES when querying datasets.Munyoki Kilyungi
2023-10-27Add extra prefixes to the context.Munyoki Kilyungi
2023-10-27Implement "GET /group/:name".Munyoki Kilyungi
2023-10-27Implement "GET metadata/groups".Munyoki Kilyungi
2023-10-27Implement "GET /species/:name".Munyoki Kilyungi
2023-10-27Implement "GET /species".Munyoki Kilyungi
2023-10-27Implement "GET /genewikis/ncbi/:symbol".Munyoki Kilyungi
2023-10-27Delete gn3.db.rdf.sparql_query.Munyoki Kilyungi
2023-10-27Implement "GET /genewikis/gn/:symbol".Munyoki Kilyungi
2023-10-27Delete db.rdf.get_url_local_name.Munyoki Kilyungi
2023-10-27Implement "GET /metadata/phenotypes/:name".Munyoki Kilyungi
2023-10-27Remove un-used get_dataset_metadata import.Munyoki Kilyungi
2023-10-27Delete get_dataset_metadata.Munyoki Kilyungi
2023-10-27Implement "GET /metadata/genotypes/:name".Munyoki Kilyungi