diff options
Diffstat (limited to 'gn3/computations')
| -rw-r--r-- | gn3/computations/heatmap.py | 7 |
1 files changed, 5 insertions, 2 deletions
diff --git a/gn3/computations/heatmap.py b/gn3/computations/heatmap.py index 98ea26f..1b7dfb7 100644 --- a/gn3/computations/heatmap.py +++ b/gn3/computations/heatmap.py @@ -3,12 +3,15 @@ This module will contain functions to be used in computation of the data used to generate various kinds of heatmaps. """ +from functools import reduce +from typing import Any, Dict, Sequence from gn3.computations.slink import slink +from gn3.db.traits import retrieve_trait_data, retrieve_trait_info from gn3.computations.correlations2 import compute_correlation def export_trait_data( - trait_data: dict, strainlist: Sequence[str], dtype: str="val", - var_exists: bool=False, n_exists: bool=False): + trait_data: dict, strainlist: Sequence[str], dtype: str = "val", + var_exists: bool = False, n_exists: bool = False): """ Export data according to `strainlist`. Mostly used in calculating correlations. |