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| author | Muriithi Frederick Muriuki | 2021-08-31 10:50:56 +0300 |
|---|---|---|
| committer | Muriithi Frederick Muriuki | 2021-08-31 10:50:56 +0300 |
| commit | e441509a59c20a051fd5ab94710513f1968a5e02 (patch) | |
| tree | 88da10c528f6d4cee8cbb111d83c47a4bf9b555a /tests/unit/upload-data.tar.gz | |
| parent | c3f8013347e3e8850c90cb787edb2bec1f367f7d (diff) | |
| download | genenetwork3-e441509a59c20a051fd5ab94710513f1968a5e02.tar.gz | |
Update `heatmap_data` function: remove extraneous data
Issue:
https://github.com/genenetwork/gn-gemtext-threads/blob/main/topics/gn1-migration-to-gn2/clustering.gmi
* gn3/computations/heatmap.py: update function
* gn3/db/traits.py: new function
Remove extraneous data and arguments from the function.
- Load the genotype file
- Generate traits file
- Provide both raw traits data, and exported traits data in return
Diffstat (limited to 'tests/unit/upload-data.tar.gz')
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