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| author | BonfaceKilz | 2021-06-21 08:58:27 +0300 |
|---|---|---|
| committer | GitHub | 2021-06-21 08:58:27 +0300 |
| commit | f949189dc727976a1574a57d3b0e895ff6598d07 (patch) | |
| tree | e7e0634176d55afefa25467652b4f97601287837 /gn3/settings.py | |
| parent | d653a635d0efd2291754c18f51d31f91a1c0a25c (diff) | |
| parent | 10140ab707021dd2dffb1b439f52a62e3d59c29a (diff) | |
| download | genenetwork3-f949189dc727976a1574a57d3b0e895ff6598d07.tar.gz | |
Merge pull request #20 from genenetwork/feature/biweight-correlation
add biweight r script and tests
Diffstat (limited to 'gn3/settings.py')
| -rw-r--r-- | gn3/settings.py | 6 |
1 files changed, 5 insertions, 1 deletions
diff --git a/gn3/settings.py b/gn3/settings.py index ecfd502..770ba3d 100644 --- a/gn3/settings.py +++ b/gn3/settings.py @@ -14,9 +14,13 @@ TMPDIR = os.environ.get("TMPDIR", tempfile.gettempdir()) RQTL_WRAPPER = "rqtl_wrapper.R" # SQL confs -SQL_URI = os.environ.get("SQL_URI", "mysql://webqtlout:webqtlout@localhost/db_webqtl") +SQL_URI = os.environ.get( + "SQL_URI", "mysql://webqtlout:webqtlout@localhost/db_webqtl") SECRET_KEY = "password" SQLALCHEMY_TRACK_MODIFICATIONS = False # gn2 results only used in fetching dataset info GN2_BASE_URL = "http://www.genenetwork.org/" + +# biweight script +BIWEIGHT_RSCRIPT = "~/genenetwork3/script/calculate_biweight.R" |