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authorMuriithi Frederick Muriuki2021-08-17 11:05:03 +0300
committerMuriithi Frederick Muriuki2021-08-17 11:05:03 +0300
commit99bfda81abe76b3bb3f7034cf6cdac21c8d50726 (patch)
tree1248bd976ec6792ac62eb8bbb6efd54788f47251 /gn3/computations
parenta2f6406909951a80dc4ead809a09e8de2c15200d (diff)
downloadgenenetwork3-99bfda81abe76b3bb3f7034cf6cdac21c8d50726.tar.gz
Make child sequence a list
Issue: https://github.com/genenetwork/gn-gemtext-threads/blob/main/topics/gn1-migration-to-gn2/clustering.gmi * Since the `slink` function assigns values to the `listcopy` variable and its children, this commit ensures that the sequence is a list to allow for the assignment. If the child-sequence is a tuple, that would lead to an exception.
Diffstat (limited to 'gn3/computations')
-rw-r--r--gn3/computations/slink.py2
1 files changed, 1 insertions, 1 deletions
diff --git a/gn3/computations/slink.py b/gn3/computations/slink.py
index 5953e6b..3d7a576 100644
--- a/gn3/computations/slink.py
+++ b/gn3/computations/slink.py
@@ -161,7 +161,7 @@ def slink(lists):
try:
size = len(lists)
listindexcopy = list(range(size))
- listscopy = [child[:] for child in lists]
+ listscopy = [list(child[:]) for child in lists]
init_size = size
candidate = []
while init_size > 2: