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authorMuriithi Frederick Muriuki2021-08-17 11:05:03 +0300
committerArun Isaac2021-08-18 08:47:34 +0000
commitd10ee60d2200eefb29a22b0a84cd19569235b354 (patch)
tree1248bd976ec6792ac62eb8bbb6efd54788f47251 /gn3/computations/slink.py
parent45bc6cbbf1878c9271d410f37e24ad44f5100c2f (diff)
downloadgenenetwork3-d10ee60d2200eefb29a22b0a84cd19569235b354.tar.gz
Make child sequence a list
Issue: https://github.com/genenetwork/gn-gemtext-threads/blob/main/topics/gn1-migration-to-gn2/clustering.gmi * Since the `slink` function assigns values to the `listcopy` variable and its children, this commit ensures that the sequence is a list to allow for the assignment. If the child-sequence is a tuple, that would lead to an exception.
Diffstat (limited to 'gn3/computations/slink.py')
-rw-r--r--gn3/computations/slink.py2
1 files changed, 1 insertions, 1 deletions
diff --git a/gn3/computations/slink.py b/gn3/computations/slink.py
index 5953e6b..3d7a576 100644
--- a/gn3/computations/slink.py
+++ b/gn3/computations/slink.py
@@ -161,7 +161,7 @@ def slink(lists):
try:
size = len(lists)
listindexcopy = list(range(size))
- listscopy = [child[:] for child in lists]
+ listscopy = [list(child[:]) for child in lists]
init_size = size
candidate = []
while init_size > 2: