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$(function() {
var gndata; // loaded once for all to use
process_json = function(data) {
populate_species();
return apply_default();
};
$.getJSON(gn_server_url+"int/menu/main.json",
function(data) {
gndata = data;
console.log("***** GOT DATA from GN_SERVER ****");
console.log(gndata);
populate_species();
}).error(function() {
console.log("ERROR: GN_SERVER not responding");
alert("ERROR: GN_SERVER internal REST API is not responding");
});
var populate_species = function() {
var species_list = Object.keys(gndata.menu).map(function(species) {
var mitem = gndata.menu[species].menu
// console.log("Species menu:",species,mitem)
return [species,mitem];
});
redo_dropdown($('#species'), species_list);
return populate_group();
};
window.populate_species = populate_species;
var populate_group = function() {
var species = $('#species').val();
var groups = gndata.groups[species].map(function(item) {
console.log("group:",item);
return item.slice(1,3);
})
redo_dropdown($('#group'), groups);
return populate_type();
};
window.populate_group = populate_group;
var populate_type = function() {
var species = $('#species').val();
var group = $('#group').val();
var type_list = gndata.menu[species].types[group].map(function(item) {
return [item,item];
});
redo_dropdown($('#type'), type_list);
return populate_dataset();
};
window.populate_type = populate_type;
var populate_dataset = function() {
var species = $('#species').val();
var group = $('#group').val();
var type = $('#type').val();
var dataset_list = gndata.datasets[species][group][type].map(function(item) {
return item.slice(1,3);
})
return redo_dropdown($('#dataset'), dataset_list);
};
window.populate_dataset = populate_dataset;
var redo_dropdown = function(dropdown, items) {
var item, _i, _len, _results;
console.log("in redo:", dropdown, items);
dropdown.empty();
_results = [];
for (_i = 0, _len = items.length; _i < _len; _i++) {
item = items[_i];
if (item.length > 2){
_results.push(dropdown.append($("<option data-id=\""+item[0]+"\" />").val(item[1]).text(item[2])));
} else {
_results.push(dropdown.append($("<option />").val(item[0]).text(item[1])));
}
}
return _results;
};
$('#species').change((function(_this) {
return function() {
return populate_group();
};
})(this));
$('#group').change((function(_this) {
return function() {
return populate_type();
};
})(this));
$('#type').change((function(_this) {
return function() {
return populate_dataset();
};
})(this));
open_window = function(url, name) {
var options;
options = "menubar=1,toolbar=1,location=1,resizable=1,status=1,scrollbars=1,directories=1,width=900";
return open(url, name, options).focus();
};
var group_info = function() {
var group, species, url;
species = $('#species').val();
group = $('#group').val();
url = "/" + species + "Cross.html#" + group;
return open_window(url, "Group Info");
};
$('#group_info').click(group_info);
var dataset_info = function() {
var dataset, url;
accession_id = $('#dataset option:selected').data("id");
url = "http://genenetwork.org/webqtl/main.py?FormID=sharinginfo&GN_AccessionId=" + accession_id;
return open_window(url, "Dataset Info");
};
$('#dataset_info').click(dataset_info);
var make_default = function() {
var holder, item, jholder, _i, _len, _ref;
alert("The current settings are now your default.")
holder = {};
_ref = ['species', 'group', 'type', 'dataset'];
for (_i = 0, _len = _ref.length; _i < _len; _i++) {
item = _ref[_i];
holder[item] = $("#" + item).val();
}
jholder = JSON.stringify(holder);
return $.cookie('search_defaults', jholder, {
expires: 365
});
};
var apply_default = function() {
var defaults, item, populate_function, _i, _len, _ref, _results;
defaults = $.cookie('search_defaults');
if (defaults) {
defaults = $.parseJSON(defaults);
} else {
defaults = {
species: "mouse",
group: "BXD",
type: "Hippocampus mRNA",
dataset: "HC_M2_0606_P"
};
}
_ref = [['species', 'group'], ['group', 'type'], ['type', 'dataset'], ['dataset', null]];
_results = [];
for (_i = 0, _len = _ref.length; _i < _len; _i++) {
item = _ref[_i];
$("#" + item[0]).val(defaults[item[0]]);
if (item[1]) {
populate_function = "populate_" + item[1];
console.log("Calling:", populate_function);
_results.push(window[populate_function]());
} else {
_results.push(void 0);
}
}
return _results;
};
var check_search_term = function() {
var or_search_term, and_search_term;
or_search_term = $('#or_search').val();
and_search_term = $('#and_search').val();
console.log("or_search_term:", or_search_term);
console.log("and_search_term:", and_search_term);
if (or_search_term === "" && and_search_term === "") {
alert("Please enter one or more search terms or search equations.");
return false;
}
};
$("#make_default").click(make_default);
return $("#btsearch").click(check_search_term);
});
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