# Copyright (C) University of Tennessee Health Science Center, Memphis, TN. # # This program is free software: you can redistribute it and/or modify it # under the terms of the GNU Affero General Public License # as published by the Free Software Foundation, either version 3 of the # License, or (at your option) any later version. # # This program is distributed in the hope that it will be useful, # but WITHOUT ANY WARRANTY; without even the implied warranty of # MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. # See the GNU Affero General Public License for more details. # # This program is available from Source Forge: at GeneNetwork Project # (sourceforge.net/projects/genenetwork/). # # Contact Drs. Robert W. Williams and Xiaodong Zhou (2010) # at rwilliams@uthsc.edu and xzhou15@uthsc.edu # # # # This module is used by GeneNetwork project (www.genenetwork.org) # # Created by GeneNetwork Core Team 2011/12/7 # # Last updated by GeneNetwork Core Team 2011/12/7 from base.templatePage import templatePage from htmlgen import HTMLgen2 as HT import string import os class TissueAbbreviationPage (templatePage): def __init__(self,fd): templatePage.__init__(self, fd) shortName=fd.formdata.getfirst("shortTissueName", ',') fullName=fd.formdata.getfirst("fullTissueName", ',') shortNameList=[] fullNameList=[] if shortName: shortNameList=shortName.split(',') if fullName: fullNameList=fullName.split(',') tissueAbbrDict={} for i, item in enumerate(shortNameList): tissueAbbrDict[item]=fullNameList[i] if tissueAbbrDict: # Creates the table for the fullname and shortname of Tissue tissueAbbrTable = HT.TableLite(border=1, cellspacing=5, cellpadding=3, Class="collap") shortNameList = tissueAbbrDict.keys() shortNameList.sort() abbrHeaderStyle="fs14 fwb ffl" abbrStyle="fs14 fwn ffl" tissueAbbrTable.append(HT.TR(HT.TD('Abbr ', Class=abbrHeaderStyle, NOWRAP = 1),HT.TD('Full Name ', Class=abbrHeaderStyle, NOWRAP = 1))) for item in shortNameList: thisTR = HT.TR(HT.TD(item, Class=abbrStyle, NOWRAP = 1)) thisTR.append(HT.TD(tissueAbbrDict[item], Class=abbrStyle, NOWRAP = 1)) tissueAbbrTable.append(thisTR) self.dict['body'] = HT.TD(HT.Paragraph("Tissue Abbreviation", Class="title"), HT.Blockquote(tissueAbbrTable)) self.dict['title'] = "Tissue Abbreviation" else: heading = "Tissue abbreviation" detail = ["Cannot found Tissue Abbreviation. Please try again later."] self.error(heading=heading,detail=detail) return