Hippocampus mRNA - Hippocampus Illumina RSE (Oct08) RankInv beta modify this page

Accession number: GN212

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Summary:

Experimental data set: Restraint stress followed by a single ethanol injection (RSE). Survival period X hours. Please copy text and style for other INFO pages and see Mike Miles INFO pages.

This data set entered by Arthur Centeno and Lu Lu, Oct 15, 2008. Please contact Dr. Lu Lu regarding these expression data at lulu@utmem.edu.

Replication and Sample Balance: We obtained matched male and female sample from 28 strains. The following three strains are represented by male samples only: LXS25, 88, and 103. Two other strains, LXS43 and 50 are represented only by female samples.

Legend:Sex balance of the RSE data set is revealed by expression of the Xist RNA (Illumina probe ILM1042800446). Male samples have low expression of Xist (about 7 units), whereas females have high expression (about 13 units). Each bar provides the mean expression value (log2 transformed) for a single strain. Strains with both male and female samples have intermediate averages and large error bars.

About the cases used to generate this set of data:

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About the tissue used to generate this set of data:

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IndexTubeIDGroupStrainAgeSexSource
1R2595E.1GDP129S1/SvImJ59FUTHSC RW

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IndexTubeIDStrainOriginal CELScale factorBackground AveragePresentAbsentMarginalAFFX-b-ActinMur (3'/5')AFFX-GapdhMur (3'/5')Batch IdUsed for batch control
1R2595E.1129S1/SvImJR2595E.1.CEL1.7911561.00%37.50%1.50%1.460.771Y

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GEO Series Data: This section to be used for GEO submission of the whole series of arrays

GSE Series

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