Bug Report Form
Bug Report
Traceback (most recent call last):
File "./cmdLine.py", line 120, in ?
page = MultipleIntMappingPage(fd)
File "/node_apps/www/cgi-bin/intervalPage.py", line 2733, in __init__
IntMappingPage.__init__(self,fd)
File "/node_apps/www/cgi-bin/intervalPage.py", line 228, in __init__
LRSArray = _genotype.permutation(strains = _strains, trait = _vals, nperm=fd.nperm)
IndexError: the length of the strain list and the value list are different,
or they are less than 8
Bug Report
Traceback (most recent call last):
File "./cmdLine.py", line 120, in ?
page = MultipleIntMappingPage(fd)
File "/node_apps/www/cgi-bin/intervalPage.py", line 2733, in __init__
IntMappingPage.__init__(self,fd)
File "/node_apps/www/cgi-bin/intervalPage.py", line 228, in __init__
LRSArray = _genotype.permutation(strains = _strains, trait = _vals, nperm=fd.nperm)
IndexError: the length of the strain list and the value list are different,
or they are less than 8
Bug Report
Traceback (most recent call last):
File "/home/hqli/public_html/cgi-bin/beta/main.py", line 162, in ?
page = SearchResultPage(fd)
File "/home/hqli/public_html/cgi-bin/beta/searchPage.py", line 493, in __init__
self.cursor.execute(item)
File "/usr/lib/python2.3/site-packages/MySQLdb/cursors.py", line 137, in execute
self.errorhandler(self, exc, value)
File "/usr/lib/python2.3/site-packages/MySQLdb/connections.py", line 33, in defaulterrorhandler
raise errorclass, errorvalue
ProgrammingError: (1064, "You have an error in your SQL syntax; check the manual that corresponds to your MySQL server version for the right syntax to use near ' Table1.Name=Table3.Name , Table2.Name=Table3.Name GROUP BY Table1.Name) as Com' at line 1")
Bug Report
Traceback (most recent call last):
File "/home/hqli/public_html/cgi-bin/beta/main.py", line 162, in ?
page = SearchResultPage(fd)
File "/home/hqli/public_html/cgi-bin/beta/searchPage.py", line 493, in __init__
self.cursor.execute(item)
File "/usr/lib/python2.3/site-packages/MySQLdb/cursors.py", line 137, in execute
self.errorhandler(self, exc, value)
File "/usr/lib/python2.3/site-packages/MySQLdb/connections.py", line 33, in defaulterrorhandler
raise errorclass, errorvalue
ProgrammingError: (1064, "You have an error in your SQL syntax; check the manual that corresponds to your MySQL server version for the right syntax to use near ' Table1.Name=Table3.Name , Table2.Name=Table3.Name GROUP BY Table1.Name) as Com' at line 1")
Bug Report
Traceback (most recent call last):
File "/home/hqli/public_html/cgi-bin/beta/main.py", line 162, in ?
page = SearchResultPage(fd)
File "/home/hqli/public_html/cgi-bin/beta/searchPage.py", line 494, in __init__
self.cursor.execute(item)
File "/usr/lib/python2.3/site-packages/MySQLdb/cursors.py", line 137, in execute
self.errorhandler(self, exc, value)
File "/usr/lib/python2.3/site-packages/MySQLdb/connections.py", line 33, in defaulterrorhandler
raise errorclass, errorvalue
ProgrammingError: (1064, "You have an error in your SQL syntax; check the manual that corresponds to your MySQL server version for the right syntax to use near ' Table1.Name=Table3.Name , Table2.Name=Table3.Name GROUP BY Table1.Name) as Com' at line 1")
Bug Report
Traceback (most recent call last):
File "/home/hqli/public_html/cgi-bin/beta/main.py", line 160, in ?
from searchPage import *
File "/home/hqli/public_html/cgi-bin/beta/searchPage.py", line 539
i += 1
^
SyntaxError: invalid syntax
Bug Report
Traceback (most recent call last):
File "/home/hqli/public_html/cgi-bin/beta/main.py", line 160, in ?
from searchPage import *
File "/home/hqli/public_html/cgi-bin/beta/searchPage.py", line 577
i += 1
^
SyntaxError: invalid syntax
Bug Report
Traceback (most recent call last):
File "/home/hqli/public_html/cgi-bin/beta/main.py", line 160, in ?
from searchPage import *
File "/home/hqli/public_html/cgi-bin/beta/searchPage.py", line 577
i += 1
^
SyntaxError: invalid syntax
Bug Report
Traceback (most recent call last):
File "/home/hqli/public_html/cgi-bin/beta/main.py", line 160, in ?
from searchPage import *
File "/home/hqli/public_html/cgi-bin/beta/searchPage.py", line 554
SearchText.append(HT.Italic('match the term '), Id='green'))
^
SyntaxError: invalid syntax
Bug Report
Traceback (most recent call last):
File "/home/hqli/public_html/cgi-bin/beta/main.py", line 160, in ?
from searchPage import *
File "/home/hqli/public_html/cgi-bin/beta/searchPage.py", line 555
ttext.append(HT.Italic('match the term '), Id='green'))
^
SyntaxError: invalid syntax
Bug Report
Traceback (most recent call last):
File "/node_apps/www/webqtl/main.py", line 162, in ?
page = SearchResultPage(fd)
File "/node_apps/www/cgi-bin/searchPage.py", line 86, in __init__
self.dbPrefix = map(lambda X: X.prefix, self.dbInfos)
File "/node_apps/www/cgi-bin/searchPage.py", line 86, in
self.dbPrefix = map(lambda X: X.prefix, self.dbInfos)
AttributeError: 'NoneType' object has no attribute 'prefix'
Bug Report
Traceback (most recent call last):
File "/node_apps/www/webqtl/main.py", line 162, in ?
page = SearchResultPage(fd)
File "/node_apps/www/cgi-bin/searchPage.py", line 86, in __init__
self.dbPrefix = map(lambda X: X.prefix, self.dbInfos)
File "/node_apps/www/cgi-bin/searchPage.py", line 86, in
self.dbPrefix = map(lambda X: X.prefix, self.dbInfos)
AttributeError: 'NoneType' object has no attribute 'prefix'
Bug Report
Traceback (most recent call last):
File "/node_apps/www/webqtl/main.py", line 162, in ?
page = SearchResultPage(fd)
File "/node_apps/www/cgi-bin/searchPage.py", line 86, in __init__
self.dbPrefix = map(lambda X: X.prefix, self.dbInfos)
File "/node_apps/www/cgi-bin/searchPage.py", line 86, in
self.dbPrefix = map(lambda X: X.prefix, self.dbInfos)
AttributeError: 'NoneType' object has no attribute 'prefix'
Bug Report
Traceback (most recent call last):
File "/node_apps/www/webqtl/main.py", line 162, in ?
page = SearchResultPage(fd)
File "/node_apps/www/cgi-bin/searchPage.py", line 86, in __init__
self.dbPrefix = map(lambda X: X.prefix, self.dbInfos)
File "/node_apps/www/cgi-bin/searchPage.py", line 86, in
self.dbPrefix = map(lambda X: X.prefix, self.dbInfos)
AttributeError: 'NoneType' object has no attribute 'prefix'
Bug Report
Traceback (most recent call last):
File "/node_apps/www/webqtl/main.py", line 162, in ?
page = SearchResultPage(fd)
File "/node_apps/www/cgi-bin/searchPage.py", line 86, in __init__
self.dbPrefix = map(lambda X: X.prefix, self.dbInfos)
File "/node_apps/www/cgi-bin/searchPage.py", line 86, in
self.dbPrefix = map(lambda X: X.prefix, self.dbInfos)
AttributeError: 'NoneType' object has no attribute 'prefix'
Bug Report
Traceback (most recent call last):
File "/node_apps/www/webqtl/main.py", line 162, in ?
page = SearchResultPage(fd)
File "/node_apps/www/cgi-bin/searchPage.py", line 86, in __init__
self.dbPrefix = map(lambda X: X.prefix, self.dbInfos)
File "/node_apps/www/cgi-bin/searchPage.py", line 86, in
self.dbPrefix = map(lambda X: X.prefix, self.dbInfos)
AttributeError: 'NoneType' object has no attribute 'prefix'
Bug Report
Traceback (most recent call last):
File "/home/hqli/public_html/cgi-bin/beta/main.py", line 162, in ?
page = SearchResultPage(fd)
File "/home/hqli/public_html/cgi-bin/beta/searchPage.py", line 493, in __init__
self.cursor.execute(item)
File "/usr/lib/python2.3/site-packages/MySQLdb/cursors.py", line 137, in execute
self.errorhandler(self, exc, value)
File "/usr/lib/python2.3/site-packages/MySQLdb/connections.py", line 33, in defaulterrorhandler
raise errorclass, errorvalue
ProgrammingError: (1064, "You have an error in your SQL syntax; check the manual that corresponds to your MySQL server version for the right syntax to use near 'GROUP BY Table1.Name) as CombineTable WHERE ProbeSet.Id = ProbeSetXRef.ProbeSetI' at line 1")
Bug Report
Traceback (most recent call last):
File "/home/hqli/public_html/cgi-bin/beta/main.py", line 162, in ?
page = SearchResultPage(fd)
File "/home/hqli/public_html/cgi-bin/beta/searchPage.py", line 493, in __init__
self.cursor.execute(item)
File "/usr/lib/python2.3/site-packages/MySQLdb/cursors.py", line 137, in execute
self.errorhandler(self, exc, value)
File "/usr/lib/python2.3/site-packages/MySQLdb/connections.py", line 33, in defaulterrorhandler
raise errorclass, errorvalue
ProgrammingError: (1064, "You have an error in your SQL syntax; check the manual that corresponds to your MySQL server version for the right syntax to use near 'GROUP BY Table1.Name) as CombineTable WHERE ProbeSet.Id = ProbeSetXRef.ProbeSetI' at line 1")
Bug Report
Traceback (most recent call last):
File "/home/hqli/public_html/cgi-bin/beta/main.py", line 162, in ?
page = SearchResultPage(fd)
File "/home/hqli/public_html/cgi-bin/beta/searchPage.py", line 493, in __init__
self.cursor.execute(item)
File "/usr/lib/python2.3/site-packages/MySQLdb/cursors.py", line 137, in execute
self.errorhandler(self, exc, value)
File "/usr/lib/python2.3/site-packages/MySQLdb/connections.py", line 33, in defaulterrorhandler
raise errorclass, errorvalue
ProgrammingError: (1064, "You have an error in your SQL syntax; check the manual that corresponds to your MySQL server version for the right syntax to use near 'GROUP BY Table1.Name) as CombineTable WHERE ProbeSet.Id = ProbeSetXRef.ProbeSetI' at line 1")
Bug Report
Traceback (most recent call last):
File "./cmdLine.py", line 120, in ?
page = MultipleIntMappingPage(fd)
File "/node_apps/www/cgi-bin/beta/intervalPage.py", line 2733, in __init__
IntMappingPage.__init__(self,fd)
File "/node_apps/www/cgi-bin/beta/intervalPage.py", line 228, in __init__
LRSArray = _genotype.permutation(strains = _strains, trait = _vals, nperm=fd.nperm)
IndexError: the length of the strain list and the value list are different,
or they are less than 8
Bug Report
Traceback (most recent call last):
File "/home/hqli/public_html/cgi-bin/beta/main.py", line 162, in ?
page = SearchResultPage(fd)
File "/home/hqli/public_html/cgi-bin/beta/searchPage.py", line 493, in __init__
self.cursor.execute(item)
File "/usr/lib/python2.3/site-packages/MySQLdb/cursors.py", line 137, in execute
self.errorhandler(self, exc, value)
File "/usr/lib/python2.3/site-packages/MySQLdb/connections.py", line 33, in defaulterrorhandler
raise errorclass, errorvalue
ProgrammingError: (1064, "You have an error in your SQL syntax; check the manual that corresponds to your MySQL server version for the right syntax to use near 'GROUP BY Table1.Name) as CombineTable WHERE ProbeSet.Id = ProbeSetXRef.ProbeSetI' at line 1")
Bug Report
Traceback (most recent call last):
File "/home/hqli/public_html/cgi-bin/beta/main.py", line 162, in ?
page = SearchResultPage(fd)
File "/home/hqli/public_html/cgi-bin/beta/searchPage.py", line 494, in __init__
self.cursor.execute(item)
File "/usr/lib/python2.3/site-packages/MySQLdb/cursors.py", line 137, in execute
self.errorhandler(self, exc, value)
File "/usr/lib/python2.3/site-packages/MySQLdb/connections.py", line 33, in defaulterrorhandler
raise errorclass, errorvalue
ProgrammingError: (1064, "You have an error in your SQL syntax; check the manual that corresponds to your MySQL server version for the right syntax to use near 'GROUP BY Table1.Name) as CombineTable WHERE ProbeSet.Id = ProbeSetXRef.ProbeSetI' at line 1")
Bug Report
Traceback (most recent call last):
File "./cmdLine.py", line 146, in ?
page3 = MultipleIntMappingPage(fd)
File "/node_apps/www/cgi-bin/intervalPage.py", line 2733, in __init__
IntMappingPage.__init__(self,fd)
File "/node_apps/www/cgi-bin/intervalPage.py", line 358, in __init__
gifmap = self.plotIntMapping(intCanvas, _LRSResult, _bootResult, fd, offset = (75, 120, 80, 10))
File "/node_apps/www/cgi-bin/intervalPage.py", line 2374, in plotIntMapping
additiveStep = (additiveScale[1]-additiveScale[0])/additiveScale[2]
TypeError: unsubscriptable object
Bug Report
Traceback (most recent call last):
File "./cmdLine.py", line 146, in ?
page3 = MultipleIntMappingPage(fd)
File "/node_apps/www/cgi-bin/intervalPage.py", line 2733, in __init__
IntMappingPage.__init__(self,fd)
File "/node_apps/www/cgi-bin/intervalPage.py", line 358, in __init__
gifmap = self.plotIntMapping(intCanvas, _LRSResult, _bootResult, fd, offset = (75, 120, 80, 10))
File "/node_apps/www/cgi-bin/intervalPage.py", line 2374, in plotIntMapping
additiveStep = (additiveScale[1]-additiveScale[0])/additiveScale[2]
TypeError: unsubscriptable object
Bug Report
Traceback (most recent call last):
File "./cmdLine.py", line 146, in ?
page3 = MultipleIntMappingPage(fd)
File "/node_apps/www/cgi-bin/intervalPage.py", line 2733, in __init__
IntMappingPage.__init__(self,fd)
File "/node_apps/www/cgi-bin/intervalPage.py", line 226, in __init__
LRSArray = _genotype.permutation(strains = _strains, trait = _vals, variance = _vars, nperm=fd.nperm)
IndexError: the length of the strain list and the value list are different,
or they are less than 8
Bug Report
Traceback (most recent call last):
File "./cmdLine.py", line 146, in ?
page3 = MultipleIntMappingPage(fd)
File "/node_apps/www/cgi-bin/intervalPage.py", line 2733, in __init__
IntMappingPage.__init__(self,fd)
File "/node_apps/www/cgi-bin/intervalPage.py", line 358, in __init__
gifmap = self.plotIntMapping(intCanvas, _LRSResult, _bootResult, fd, offset = (75, 120, 80, 10))
File "/node_apps/www/cgi-bin/intervalPage.py", line 2374, in plotIntMapping
additiveStep = (additiveScale[1]-additiveScale[0])/additiveScale[2]
TypeError: unsubscriptable object
Bug Report
Traceback (most recent call last):
File "./cmdLine.py", line 120, in ?
page = MultipleIntMappingPage(fd)
File "/node_apps/www/cgi-bin/beta/intervalPage.py", line 2733, in __init__
IntMappingPage.__init__(self,fd)
File "/node_apps/www/cgi-bin/beta/intervalPage.py", line 228, in __init__
LRSArray = _genotype.permutation(strains = _strains, trait = _vals, nperm=fd.nperm)
IndexError: the length of the strain list and the value list are different,
or they are less than 8
Bug Report
Traceback (most recent call last):
File "/node_apps/www/cgi-bin/Yanhua/main.py", line 170, in ?
page = ShowDatabasePage(fd)
File "/node_apps/www/cgi-bin/Yanhua/dataPage.py", line 930, in __init__
fd.readGenotype()
File "/node_apps/www/cgi-bin/Yanhua/DataForm.py", line 132, in readGenotype
self.genotype_1.read(os.path.join(CONFIG_genodir, self.RISet + '.geno'))
SystemError: The given file doesn't exist
Bug Report
Traceback (most recent call last):
File "/home/hqli/public_html/cgi-bin/beta/main.py", line 170, in ?
page = ShowDatabasePage(fd)
File "/home/hqli/public_html/cgi-bin/beta/dataPage.py", line 882, in __init__
fd.readGenotype()
File "/home/hqli/public_html/cgi-bin/beta/DataForm.py", line 131, in readGenotype
self.genotype_1.read(os.path.join(CONFIG_genodir, self.RISet + '.geno'))
SystemError: The given file doesn't exist
Bug Report
Traceback (most recent call last):
File "/node_apps/www/cgi-bin/Yanhua/main.py", line 170, in ?
page = ShowDatabasePage(fd)
File "/node_apps/www/cgi-bin/Yanhua/dataPage.py", line 930, in __init__
fd.readGenotype()
File "/node_apps/www/cgi-bin/Yanhua/DataForm.py", line 132, in readGenotype
self.genotype_1.read(os.path.join(CONFIG_genodir, self.RISet + '.geno'))
SystemError: The given file doesn't exist
Bug Report
Traceback (most recent call last):
File "/node_apps/www/cgi-bin/Yanhua/main.py", line 170, in ?
page = ShowDatabasePage(fd)
File "/node_apps/www/cgi-bin/Yanhua/dataPage.py", line 930, in __init__
fd.readGenotype()
File "/node_apps/www/cgi-bin/Yanhua/DataForm.py", line 132, in readGenotype
self.genotype_1.read(os.path.join(CONFIG_genodir, self.RISet + '.geno'))
SystemError: The given file doesn't exist
Bug Report
Traceback (most recent call last):
File "/node_apps/www/webqtl/main.py", line 33, in ?
fd = FormData(formdata)
File "/node_apps/www/cgi-bin/DataForm.py", line 99, in __init__
f1, self.mpolar, self.ppolar = ParInfo[self.RISet]
KeyError: 'BDF2-2005'
Bug Report
Traceback (most recent call last):
File "/node_apps/www/webqtl/main.py", line 33, in ?
fd = FormData(formdata)
File "/node_apps/www/cgi-bin/DataForm.py", line 99, in __init__
f1, self.mpolar, self.ppolar = ParInfo[self.RISet]
KeyError: 'BDF2-2005'
Bug Report
Traceback (most recent call last):
File "/home/hqli/public_html/cgi-bin/beta/main.py", line 170, in ?
page = ShowDatabasePage(fd)
File "/home/hqli/public_html/cgi-bin/beta/dataPage.py", line 882, in __init__
fd.readGenotype()
File "/home/hqli/public_html/cgi-bin/beta/DataForm.py", line 131, in readGenotype
self.genotype_1.read(os.path.join(CONFIG_genodir, self.RISet + '.geno'))
SystemError: The given file doesn't exist
Bug Report
Traceback (most recent call last):
File "/home/hqli/public_html/cgi-bin/beta/main.py", line 160, in ?
from searchPage import *
File "/home/hqli/public_html/cgi-bin/beta/searchPage.py", line 495
print item,
^
SyntaxError: invalid syntax
Bug Report
Traceback (most recent call last):
File "./cmdLine.py", line 120, in ?
page = MultipleIntMappingPage(fd)
File "/node_apps/www/cgi-bin/intervalPage.py", line 2733, in __init__
IntMappingPage.__init__(self,fd)
File "/node_apps/www/cgi-bin/intervalPage.py", line 228, in __init__
LRSArray = _genotype.permutation(strains = _strains, trait = _vals, nperm=fd.nperm)
IndexError: the length of the strain list and the value list are different,
or they are less than 8
Bug Report
Traceback (most recent call last):
File "./cmdLine.py", line 120, in ?
page = MultipleIntMappingPage(fd)
File "/node_apps/www/cgi-bin/intervalPage.py", line 2733, in __init__
IntMappingPage.__init__(self,fd)
File "/node_apps/www/cgi-bin/intervalPage.py", line 228, in __init__
LRSArray = _genotype.permutation(strains = _strains, trait = _vals, nperm=fd.nperm)
IndexError: the length of the strain list and the value list are different,
or they are less than 8
Bug Report
Traceback (most recent call last):
File "./cmdLine.py", line 120, in ?
page = MultipleIntMappingPage(fd)
File "/node_apps/www/cgi-bin/beta/intervalPage.py", line 2815, in __init__
LRSResult = _genotype.regression(_strains, _vals)
IndexError: the length of the strain list and the value list are different,
or they are less than 8
Bug Report
Traceback (most recent call last):
File "./cmdLine.py", line 120, in ?
page = MultipleIntMappingPage(fd)
File "/node_apps/www/cgi-bin/beta/intervalPage.py", line 2733, in __init__
IntMappingPage.__init__(self,fd)
File "/node_apps/www/cgi-bin/beta/intervalPage.py", line 228, in __init__
LRSArray = _genotype.permutation(strains = _strains, trait = _vals, nperm=fd.nperm)
IndexError: the length of the strain list and the value list are different,
or they are less than 8
Bug Report
Traceback (most recent call last):
File "./cmdLine.py", line 120, in ?
page = MultipleIntMappingPage(fd)
File "/node_apps/www/cgi-bin/beta/intervalPage.py", line 2733, in __init__
IntMappingPage.__init__(self,fd)
File "/node_apps/www/cgi-bin/beta/intervalPage.py", line 228, in __init__
LRSArray = _genotype.permutation(strains = _strains, trait = _vals, nperm=fd.nperm)
IndexError: the length of the strain list and the value list are different,
or they are less than 8
Bug Report
Traceback (most recent call last):
File "./cmdLine.py", line 120, in ?
page = MultipleIntMappingPage(fd)
File "/node_apps/www/cgi-bin/beta/intervalPage.py", line 2733, in __init__
IntMappingPage.__init__(self,fd)
File "/node_apps/www/cgi-bin/beta/intervalPage.py", line 228, in __init__
LRSArray = _genotype.permutation(strains = _strains, trait = _vals, nperm=fd.nperm)
IndexError: the length of the strain list and the value list are different,
or they are less than 8
Bug Report
Traceback (most recent call last):
File "./cmdLine.py", line 120, in ?
page = MultipleIntMappingPage(fd)
File "/node_apps/www/cgi-bin/beta/intervalPage.py", line 2733, in __init__
IntMappingPage.__init__(self,fd)
File "/node_apps/www/cgi-bin/beta/intervalPage.py", line 228, in __init__
LRSArray = _genotype.permutation(strains = _strains, trait = _vals, nperm=fd.nperm)
IndexError: the length of the strain list and the value list are different,
or they are less than 8
Bug Report
Traceback (most recent call last):
File "./cmdLine.py", line 146, in ?
page3 = MultipleIntMappingPage(fd)
File "/node_apps/www/cgi-bin/beta/intervalPage.py", line 2733, in __init__
IntMappingPage.__init__(self,fd)
File "/node_apps/www/cgi-bin/beta/intervalPage.py", line 228, in __init__
LRSArray = _genotype.permutation(strains = _strains, trait = _vals, nperm=fd.nperm)
IndexError: the length of the strain list and the value list are different,
or they are less than 8
Bug Report
Traceback (most recent call last):
File "/node_apps/www/webqtl/main.py", line 136, in ?
page = editHtmlPage(fd)
File "/node_apps/www/cgi-bin/upddataPage.py", line 1060, in __init__
fp = open(fileName, 'wb')
IOError: [Errno 2] No such file or directory: '/node_apps/www/html/webqtl//webqtl/main.py'
Bug Report
Traceback (most recent call last):
File "./cmdLine.py", line 120, in ?
page = MultipleIntMappingPage(fd)
File "/node_apps/www/cgi-bin/beta/intervalPage.py", line 2815, in __init__
LRSResult = _genotype.regression(_strains, _vals)
IndexError: the length of the strain list and the value list are different,
or they are less than 8
Bug Report
Traceback (most recent call last):
File "./cmdLine.py", line 120, in ?
page = MultipleIntMappingPage(fd)
File "/node_apps/www/cgi-bin/beta/intervalPage.py", line 2733, in __init__
IntMappingPage.__init__(self,fd)
File "/node_apps/www/cgi-bin/beta/intervalPage.py", line 228, in __init__
LRSArray = _genotype.permutation(strains = _strains, trait = _vals, nperm=fd.nperm)
IndexError: the length of the strain list and the value list are different,
or they are less than 8
Bug Report
Traceback (most recent call last):
File "./cmdLine.py", line 120, in ?
page = MultipleIntMappingPage(fd)
File "/node_apps/www/cgi-bin/beta/intervalPage.py", line 2815, in __init__
LRSResult = _genotype.regression(_strains, _vals)
IndexError: the length of the strain list and the value list are different,
or they are less than 8
Bug Report
Traceback (most recent call last):
File "./cmdLine.py", line 146, in ?
page3 = MultipleIntMappingPage(fd)
File "/node_apps/www/cgi-bin/intervalPage.py", line 2733, in __init__
IntMappingPage.__init__(self,fd)
File "/node_apps/www/cgi-bin/intervalPage.py", line 358, in __init__
gifmap = self.plotIntMapping(intCanvas, _LRSResult, _bootResult, fd, offset = (75, 120, 80, 10))
File "/node_apps/www/cgi-bin/intervalPage.py", line 2374, in plotIntMapping
additiveStep = (additiveScale[1]-additiveScale[0])/additiveScale[2]
TypeError: unsubscriptable object
Bug Report
Traceback (most recent call last):
File "./cmdLine.py", line 146, in ?
page3 = MultipleIntMappingPage(fd)
File "/node_apps/www/cgi-bin/intervalPage.py", line 2733, in __init__
IntMappingPage.__init__(self,fd)
File "/node_apps/www/cgi-bin/intervalPage.py", line 358, in __init__
gifmap = self.plotIntMapping(intCanvas, _LRSResult, _bootResult, fd, offset = (75, 120, 80, 10))
File "/node_apps/www/cgi-bin/intervalPage.py", line 2374, in plotIntMapping
additiveStep = (additiveScale[1]-additiveScale[0])/additiveScale[2]
TypeError: unsubscriptable object
Bug Report
Traceback (most recent call last):
File "./cmdLine.py", line 120, in ?
page = MultipleIntMappingPage(fd)
File "/node_apps/www/cgi-bin/intervalPage.py", line 2815, in __init__
LRSResult = _genotype.regression(_strains, _vals)
IndexError: the length of the strain list and the value list are different,
or they are less than 8
Bug Report
Traceback (most recent call last):
File "./cmdLine.py", line 120, in ?
page = MultipleIntMappingPage(fd)
NameError: name 'MultipleIntMappingPage' is not defined
Bug Report
Traceback (most recent call last):
File "/node_apps/www/webqtl/main.py", line 162, in ?
page = SearchResultPage(fd)
File "/node_apps/www/cgi-bin/searchPage.py", line 435, in __init__
self.cursor.execute(item)
File "/usr/lib/python2.3/site-packages/MySQLdb/cursors.py", line 137, in execute
self.errorhandler(self, exc, value)
File "/usr/lib/python2.3/site-packages/MySQLdb/connections.py", line 33, in defaulterrorhandler
raise errorclass, errorvalue
OperationalError: (1139, "Got error 'parentheses not balanced' from regexp")
Bug Report
Traceback (most recent call last):
File "/node_apps/www/webqtl/main.py", line 73, in ?
page = ResultsPage(fd)
File "/node_apps/www/cgi-bin/resultPage.py", line 153, in __init__
resultstable = self.GenReport(fd, _genotype, _strains, _vals, _vars)
File "/node_apps/www/cgi-bin/resultPage.py", line 163, in GenReport
qtlresults = _genotype.regression(strains = _strains, trait = _vals)
IndexError: the length of the strain list and the value list are different,
or they are less than 8
Bug Report
Traceback (most recent call last):
File "/node_apps/www/webqtl/main.py", line 73, in ?
page = ResultsPage(fd)
File "/node_apps/www/cgi-bin/resultPage.py", line 153, in __init__
resultstable = self.GenReport(fd, _genotype, _strains, _vals, _vars)
File "/node_apps/www/cgi-bin/resultPage.py", line 163, in GenReport
qtlresults = _genotype.regression(strains = _strains, trait = _vals)
IndexError: the length of the strain list and the value list are different,
or they are less than 8
Bug Report
Traceback (most recent call last):
File "./cmdLine.py", line 140, in ?
page2 = CorrelationPage(fd)
File "/node_apps/www/cgi-bin/correlationPage.py", line 116, in __init__
self.cursor.execute(query)
File "/usr/lib/python2.3/site-packages/MySQLdb/cursors.py", line 137, in execute
self.errorhandler(self, exc, value)
File "/usr/lib/python2.3/site-packages/MySQLdb/connections.py", line 33, in defaulterrorhandler
raise errorclass, errorvalue
ProgrammingError: (1146, "Table 'db_webqtl.ProbeSetXRef' doesn't exist")
Bug Report
Traceback (most recent call last):
File "./cmdLine.py", line 140, in ?
page2 = CorrelationPage(fd)
File "/node_apps/www/cgi-bin/correlationPage.py", line 116, in __init__
self.cursor.execute(query)
File "/usr/lib/python2.3/site-packages/MySQLdb/cursors.py", line 137, in execute
self.errorhandler(self, exc, value)
File "/usr/lib/python2.3/site-packages/MySQLdb/connections.py", line 33, in defaulterrorhandler
raise errorclass, errorvalue
ProgrammingError: (1146, "Table 'db_webqtl.ProbeSetXRef' doesn't exist")
Bug Report
Traceback (most recent call last):
File "./cmdLine.py", line 124, in ?
page=CorrelationPage(fd)
File "/node_apps/www/cgi-bin/correlationPage.py", line 116, in __init__
self.cursor.execute(query)
File "/usr/lib/python2.3/site-packages/MySQLdb/cursors.py", line 137, in execute
self.errorhandler(self, exc, value)
File "/usr/lib/python2.3/site-packages/MySQLdb/connections.py", line 33, in defaulterrorhandler
raise errorclass, errorvalue
ProgrammingError: (1146, "Table 'db_webqtl.ProbeSetXRef' doesn't exist")
Bug Report
Traceback (most recent call last):
File "./cmdLine.py", line 124, in ?
page=CorrelationPage(fd)
File "/node_apps/www/cgi-bin/correlationPage.py", line 116, in __init__
self.cursor.execute(query)
File "/usr/lib/python2.3/site-packages/MySQLdb/cursors.py", line 137, in execute
self.errorhandler(self, exc, value)
File "/usr/lib/python2.3/site-packages/MySQLdb/connections.py", line 33, in defaulterrorhandler
raise errorclass, errorvalue
OperationalError: (1017, "Can't find file: './db_webqtl/ProbeSetXRef.frm' (errno: 13)")
Bug Report
Traceback (most recent call last):
File "./cmdLine.py", line 120, in ?
page = MultipleIntMappingPage(fd)
File "/node_apps/www/cgi-bin/intervalPage.py", line 2815, in __init__
LRSResult = _genotype.regression(_strains, _vals)
IndexError: the length of the strain list and the value list are different,
or they are less than 8
Bug Report
Traceback (most recent call last):
File "./cmdLine.py", line 146, in ?
page3 = MultipleIntMappingPage(fd)
File "/node_apps/www/cgi-bin/intervalPage.py", line 2733, in __init__
IntMappingPage.__init__(self,fd)
File "/node_apps/www/cgi-bin/intervalPage.py", line 358, in __init__
gifmap = self.plotIntMapping(intCanvas, _LRSResult, _bootResult, fd, offset = (75, 120, 80, 10))
File "/node_apps/www/cgi-bin/intervalPage.py", line 2374, in plotIntMapping
additiveStep = (additiveScale[1]-additiveScale[0])/additiveScale[2]
TypeError: unsubscriptable object
Bug Report
Traceback (most recent call last):
File "./cmdLine.py", line 120, in ?
page = MultipleIntMappingPage(fd)
File "/node_apps/www/cgi-bin/intervalPage.py", line 2815, in __init__
LRSResult = _genotype.regression(_strains, _vals)
IndexError: the length of the strain list and the value list are different,
or they are less than 8
Bug Report
Traceback (most recent call last):
File "./cmdLine.py", line 120, in ?
page = MultipleIntMappingPage(fd)
File "/node_apps/www/cgi-bin/intervalPage.py", line 2815, in __init__
LRSResult = _genotype.regression(_strains, _vals)
IndexError: the length of the strain list and the value list are different,
or they are less than 8
Bug Report
Traceback (most recent call last):
File "/home/hqli/public_html/cgi-bin/beta/main.py", line 160, in ?
from searchPage import *
File "/home/hqli/public_html/cgi-bin/beta/searchPage.py", line 16
thekeys = fd.keys
^
SyntaxError: invalid syntax
Bug Report
Traceback (most recent call last):
File "/home/hqli/public_html/cgi-bin/beta/main.py", line 160, in ?
from searchPage import *
File "/home/hqli/public_html/cgi-bin/beta/searchPage.py", line 16
for key in fd.keys:
^
SyntaxError: invalid syntax
Bug Report
Traceback (most recent call last):
File "/home/hqli/public_html/cgi-bin/beta/main.py", line 160, in ?
from searchPage import *
File "/home/hqli/public_html/cgi-bin/beta/searchPage.py", line 16
for akey in fd.formdata.keys:
^
SyntaxError: invalid syntax
Bug Report
Traceback (most recent call last):
File "/home/hqli/public_html/cgi-bin/beta/main.py", line 160, in ?
from searchPage import *
File "/home/hqli/public_html/cgi-bin/beta/searchPage.py", line 17
print fd.formdata.keys
^
SyntaxError: invalid syntax
Bug Report
Traceback (most recent call last):
File "/home/hqli/public_html/cgi-bin/beta/main.py", line 160, in ?
from searchPage import *
File "/home/hqli/public_html/cgi-bin/beta/searchPage.py", line 17
print 'fd.formdata.keys'
^
SyntaxError: invalid syntax
Bug Report
Traceback (most recent call last):
File "/home/hqli/public_html/cgi-bin/beta/main.py", line 160, in ?
from searchPage import *
File "/home/hqli/public_html/cgi-bin/beta/searchPage.py", line 16
self.database = fd.formdata.getvalue('database', '')
^
SyntaxError: invalid syntax
Bug Report
Traceback (most recent call last):
File "/home/hqli/public_html/cgi-bin/beta/main.py", line 162, in ?
page = SearchResultPage(fd)
File "/home/hqli/public_html/cgi-bin/beta/searchPage.py", line 16, in __init__
print fd.formdata.keys.length
AttributeError: 'function' object has no attribute 'length'
Bug Report
Traceback (most recent call last):
File "/home/hqli/public_html/cgi-bin/beta/main.py", line 162, in ?
page = SearchResultPage(fd)
File "/home/hqli/public_html/cgi-bin/beta/searchPage.py", line 16, in __init__
print length(fd.formdata.keys)
NameError: global name 'length' is not defined
Bug Report
Traceback (most recent call last):
File "/home/hqli/public_html/cgi-bin/beta/main.py", line 162, in ?
page = SearchResultPage(fd)
File "/home/hqli/public_html/cgi-bin/beta/searchPage.py", line 16, in __init__
print len(fd.formdata.keys)
TypeError: len() of unsized object
Bug Report
Traceback (most recent call last):
File "/home/hqli/public_html/cgi-bin/beta/main.py", line 162, in ?
page = SearchResultPage(fd)
File "/home/hqli/public_html/cgi-bin/beta/searchPage.py", line 16, in __init__
print len(fd.formdata.list())
TypeError: 'list' object is not callable
Bug Report
Traceback (most recent call last):
File "/home/hqli/public_html/cgi-bin/beta/main.py", line 162, in ?
page = SearchResultPage(fd)
File "/home/hqli/public_html/cgi-bin/beta/searchPage.py", line 16, in __init__
print len(fd.formdata.getlist())
TypeError: getlist() takes exactly 2 arguments (1 given)
Bug Report
Traceback (most recent call last):
File "/home/hqli/public_html/cgi-bin/beta/main.py", line 162, in ?
page = SearchResultPage(fd)
File "/home/hqli/public_html/cgi-bin/beta/searchPage.py", line 16, in __init__
print fd.formdata.getkeys()
File "/usr/src/build/475206-i386/install/usr/lib/python2.3/cgi.py", line 533, in __getattr__
raise AttributeError, name
AttributeError: getkeys
Bug Report
Traceback (most recent call last):
File "/home/hqli/public_html/cgi-bin/beta/main.py", line 162, in ?
page = SearchResultPage(fd)
File "/home/hqli/public_html/cgi-bin/beta/searchPage.py", line 18, in __init__
print fd.formdata.getValue('database')
File "/usr/src/build/475206-i386/install/usr/lib/python2.3/cgi.py", line 533, in __getattr__
raise AttributeError, name
AttributeError: getValue
Bug Report
Traceback (most recent call last):
File "/node_apps/www/webqtl/main.py", line 170, in ?
page = ShowDatabasePage(fd)
File "/node_apps/www/cgi-bin/dataPage.py", line 945, in __init__
nstrains = [[None]] * len(traitdata)
TypeError: len() of unsized object
Bug Report
Traceback (most recent call last):
File "/node_apps/www/webqtl/main.py", line 303, in ?
page = cmdCorrelation(fd)
File "/node_apps/www/cgi-bin/TextUI.py", line 433, in __init__
self.readDB()
File "/node_apps/www/cgi-bin/TextUI.py", line 555, in readDB
self.cursor.execute(query)
File "/usr/lib/python2.3/site-packages/MySQLdb/cursors.py", line 137, in execute
self.errorhandler(self, exc, value)
File "/usr/lib/python2.3/site-packages/MySQLdb/connections.py", line 33, in defaulterrorhandler
raise errorclass, errorvalue
OperationalError: (1054, "Unknown column 'LocusID' in 'field list'")
Bug Report
Traceback (most recent call last):
File "/node_apps/www/webqtl/main.py", line 303, in ?
page = cmdCorrelation(fd)
File "/node_apps/www/cgi-bin/TextUI.py", line 433, in __init__
self.readDB()
File "/node_apps/www/cgi-bin/TextUI.py", line 555, in readDB
self.cursor.execute(query)
File "/usr/lib/python2.3/site-packages/MySQLdb/cursors.py", line 137, in execute
self.errorhandler(self, exc, value)
File "/usr/lib/python2.3/site-packages/MySQLdb/connections.py", line 33, in defaulterrorhandler
raise errorclass, errorvalue
OperationalError: (1054, "Unknown column 'LocusID' in 'field list'")
Bug Report
Traceback (most recent call last):
File "/node_apps/www/webqtl/main.py", line 162, in ?
page = SearchResultPage(fd)
File "/node_apps/www/cgi-bin/searchPage.py", line 77, in __init__
self.databaseCrosses, self.databaseCrossIds= self.cursor.fetchall()[0]
IndexError: tuple index out of range
Bug Report
Traceback (most recent call last):
File "/node_apps/www/webqtl/main.py", line 170, in ?
page = ShowDatabasePage(fd)
File "/node_apps/www/cgi-bin/dataPage.py", line 872, in __init__
fd.RISet = self.cursor.fetchall()[0][0]
IndexError: tuple index out of range
Bug Report
Traceback (most recent call last):
File "/node_apps/www/webqtl/main.py", line 170, in ?
page = ShowDatabasePage(fd)
File "/node_apps/www/cgi-bin/dataPage.py", line 872, in __init__
fd.RISet = self.cursor.fetchall()[0][0]
IndexError: tuple index out of range
Bug Report
Traceback (most recent call last):
File "/node_apps/www/webqtl/main.py", line 170, in ?
page = ShowDatabasePage(fd)
File "/node_apps/www/cgi-bin/dataPage.py", line 872, in __init__
fd.RISet = self.cursor.fetchall()[0][0]
IndexError: tuple index out of range
Bug Report
Traceback (most recent call last):
File "/node_apps/www/webqtl/main.py", line 170, in ?
page = ShowDatabasePage(fd)
File "/node_apps/www/cgi-bin/dataPage.py", line 872, in __init__
fd.RISet = self.cursor.fetchall()[0][0]
IndexError: tuple index out of range
Bug Report
Traceback (most recent call last):
File "/node_apps/www/webqtl/main.py", line 162, in ?
page = SearchResultPage(fd)
File "/node_apps/www/cgi-bin/searchPage.py", line 77, in __init__
self.databaseCrosses, self.databaseCrossIds= self.cursor.fetchall()[0]
IndexError: tuple index out of range
Bug Report
Traceback (most recent call last):
File "/node_apps/www/webqtl/main.py", line 170, in ?
page = ShowDatabasePage(fd)
File "/node_apps/www/cgi-bin/dataPage.py", line 872, in __init__
fd.RISet = self.cursor.fetchall()[0][0]
IndexError: tuple index out of range
Bug Report
Traceback (most recent call last):
File "/node_apps/www/webqtl/main.py", line 170, in ?
page = ShowDatabasePage(fd)
File "/node_apps/www/cgi-bin/dataPage.py", line 872, in __init__
fd.RISet = self.cursor.fetchall()[0][0]
IndexError: tuple index out of range
Bug Report
Traceback (most recent call last):
File "/node_apps/www/webqtl/main.py", line 162, in ?
page = SearchResultPage(fd)
File "/node_apps/www/cgi-bin/searchPage.py", line 77, in __init__
self.databaseCrosses, self.databaseCrossIds= self.cursor.fetchall()[0]
IndexError: tuple index out of range
Bug Report
Traceback (most recent call last):
File "/node_apps/www/webqtl/main.py", line 162, in ?
page = SearchResultPage(fd)
File "/node_apps/www/cgi-bin/searchPage.py", line 77, in __init__
self.databaseCrosses, self.databaseCrossIds= self.cursor.fetchall()[0]
IndexError: tuple index out of range
Bug Report
Traceback (most recent call last):
File "/node_apps/www/webqtl/main.py", line 162, in ?
page = SearchResultPage(fd)
File "/node_apps/www/cgi-bin/searchPage.py", line 77, in __init__
self.databaseCrosses, self.databaseCrossIds= self.cursor.fetchall()[0]
IndexError: tuple index out of range
Bug Report
Traceback (most recent call last):
File "/node_apps/www/webqtl/main.py", line 162, in ?
page = SearchResultPage(fd)
File "/node_apps/www/cgi-bin/searchPage.py", line 77, in __init__
self.databaseCrosses, self.databaseCrossIds= self.cursor.fetchall()[0]
IndexError: tuple index out of range
Bug Report
Traceback (most recent call last):
File "/node_apps/www/webqtl/main.py", line 162, in ?
page = SearchResultPage(fd)
File "/node_apps/www/cgi-bin/searchPage.py", line 77, in __init__
self.databaseCrosses, self.databaseCrossIds= self.cursor.fetchall()[0]
IndexError: tuple index out of range
Bug Report
Traceback (most recent call last):
File "/node_apps/www/webqtl/main.py", line 162, in ?
page = SearchResultPage(fd)
File "/node_apps/www/cgi-bin/searchPage.py", line 77, in __init__
self.databaseCrosses, self.databaseCrossIds= self.cursor.fetchall()[0]
IndexError: tuple index out of range
Bug Report
Traceback (most recent call last):
File "/node_apps/www/webqtl/main.py", line 162, in ?
page = SearchResultPage(fd)
File "/node_apps/www/cgi-bin/searchPage.py", line 77, in __init__
self.databaseCrosses, self.databaseCrossIds= self.cursor.fetchall()[0]
IndexError: tuple index out of range
Bug Report
Traceback (most recent call last):
File "/node_apps/www/webqtl/main.py", line 162, in ?
page = SearchResultPage(fd)
File "/node_apps/www/cgi-bin/searchPage.py", line 77, in __init__
self.databaseCrosses, self.databaseCrossIds= self.cursor.fetchall()[0]
IndexError: tuple index out of range
Bug Report
Traceback (most recent call last):
File "/node_apps/www/webqtl/main.py", line 162, in ?
page = SearchResultPage(fd)
File "/node_apps/www/cgi-bin/searchPage.py", line 77, in __init__
self.databaseCrosses, self.databaseCrossIds= self.cursor.fetchall()[0]
IndexError: tuple index out of range
Bug Report
Traceback (most recent call last):
File "/node_apps/www/webqtl/main.py", line 162, in ?
page = SearchResultPage(fd)
File "/node_apps/www/cgi-bin/searchPage.py", line 77, in __init__
self.databaseCrosses, self.databaseCrossIds= self.cursor.fetchall()[0]
IndexError: tuple index out of range
Bug Report
Traceback (most recent call last):
File "/node_apps/www/webqtl/main.py", line 170, in ?
page = ShowDatabasePage(fd)
File "/node_apps/www/cgi-bin/dataPage.py", line 872, in __init__
fd.RISet = self.cursor.fetchall()[0][0]
IndexError: tuple index out of range
Bug Report
Traceback (most recent call last):
File "/node_apps/www/webqtl/main.py", line 162, in ?
page = SearchResultPage(fd)
File "/node_apps/www/cgi-bin/searchPage.py", line 77, in __init__
self.databaseCrosses, self.databaseCrossIds= self.cursor.fetchall()[0]
IndexError: tuple index out of range
Bug Report
Traceback (most recent call last):
File "/node_apps/www/webqtl/main.py", line 162, in ?
page = SearchResultPage(fd)
File "/node_apps/www/cgi-bin/searchPage.py", line 77, in __init__
self.databaseCrosses, self.databaseCrossIds= self.cursor.fetchall()[0]
IndexError: tuple index out of range
Bug Report
Traceback (most recent call last):
File "/node_apps/www/webqtl/main.py", line 162, in ?
page = SearchResultPage(fd)
File "/node_apps/www/cgi-bin/searchPage.py", line 77, in __init__
self.databaseCrosses, self.databaseCrossIds= self.cursor.fetchall()[0]
IndexError: tuple index out of range
Bug Report
Traceback (most recent call last):
File "/node_apps/www/webqtl/main.py", line 162, in ?
page = SearchResultPage(fd)
File "/node_apps/www/cgi-bin/searchPage.py", line 77, in __init__
self.databaseCrosses, self.databaseCrossIds= self.cursor.fetchall()[0]
IndexError: tuple index out of range
Bug Report
Traceback (most recent call last):
File "/node_apps/www/webqtl/main.py", line 162, in ?
page = SearchResultPage(fd)
File "/node_apps/www/cgi-bin/searchPage.py", line 77, in __init__
self.databaseCrosses, self.databaseCrossIds= self.cursor.fetchall()[0]
IndexError: tuple index out of range
Bug Report
Traceback (most recent call last):
File "/node_apps/www/webqtl/main.py", line 162, in ?
page = SearchResultPage(fd)
File "/node_apps/www/cgi-bin/searchPage.py", line 77, in __init__
self.databaseCrosses, self.databaseCrossIds= self.cursor.fetchall()[0]
IndexError: tuple index out of range
Bug Report
Traceback (most recent call last):
File "/node_apps/www/webqtl/main.py", line 170, in ?
page = ShowDatabasePage(fd)
File "/node_apps/www/cgi-bin/dataPage.py", line 872, in __init__
fd.RISet = self.cursor.fetchall()[0][0]
IndexError: tuple index out of range
Bug Report
Traceback (most recent call last):
File "/node_apps/www/webqtl/main.py", line 162, in ?
page = SearchResultPage(fd)
File "/node_apps/www/cgi-bin/searchPage.py", line 77, in __init__
self.databaseCrosses, self.databaseCrossIds= self.cursor.fetchall()[0]
IndexError: tuple index out of range
Bug Report
Traceback (most recent call last):
File "/node_apps/www/webqtl/main.py", line 162, in ?
page = SearchResultPage(fd)
File "/node_apps/www/cgi-bin/searchPage.py", line 77, in __init__
self.databaseCrosses, self.databaseCrossIds= self.cursor.fetchall()[0]
IndexError: tuple index out of range
Bug Report
Traceback (most recent call last):
File "/node_apps/www/webqtl/main.py", line 162, in ?
page = SearchResultPage(fd)
File "/node_apps/www/cgi-bin/searchPage.py", line 77, in __init__
self.databaseCrosses, self.databaseCrossIds= self.cursor.fetchall()[0]
IndexError: tuple index out of range
Bug Report
Traceback (most recent call last):
File "/node_apps/www/webqtl/main.py", line 162, in ?
page = SearchResultPage(fd)
File "/node_apps/www/cgi-bin/searchPage.py", line 77, in __init__
self.databaseCrosses, self.databaseCrossIds= self.cursor.fetchall()[0]
IndexError: tuple index out of range
Bug Report
Traceback (most recent call last):
File "/node_apps/www/webqtl/main.py", line 162, in ?
page = SearchResultPage(fd)
File "/node_apps/www/cgi-bin/searchPage.py", line 77, in __init__
self.databaseCrosses, self.databaseCrossIds= self.cursor.fetchall()[0]
IndexError: tuple index out of range
Bug Report
Traceback (most recent call last):
File "/node_apps/www/webqtl/main.py", line 162, in ?
page = SearchResultPage(fd)
File "/node_apps/www/cgi-bin/searchPage.py", line 77, in __init__
self.databaseCrosses, self.databaseCrossIds= self.cursor.fetchall()[0]
IndexError: tuple index out of range
Bug Report
Traceback (most recent call last):
File "/node_apps/www/webqtl/main.py", line 162, in ?
page = SearchResultPage(fd)
File "/node_apps/www/cgi-bin/searchPage.py", line 77, in __init__
self.databaseCrosses, self.databaseCrossIds= self.cursor.fetchall()[0]
IndexError: tuple index out of range
Bug Report
Traceback (most recent call last):
File "/node_apps/www/webqtl/main.py", line 162, in ?
page = SearchResultPage(fd)
File "/node_apps/www/cgi-bin/searchPage.py", line 77, in __init__
self.databaseCrosses, self.databaseCrossIds= self.cursor.fetchall()[0]
IndexError: tuple index out of range
Bug Report
Traceback (most recent call last):
File "/node_apps/www/webqtl/main.py", line 162, in ?
page = SearchResultPage(fd)
File "/node_apps/www/cgi-bin/searchPage.py", line 77, in __init__
self.databaseCrosses, self.databaseCrossIds= self.cursor.fetchall()[0]
IndexError: tuple index out of range
Bug Report
Traceback (most recent call last):
File "/node_apps/www/webqtl/main.py", line 162, in ?
page = SearchResultPage(fd)
File "/node_apps/www/cgi-bin/searchPage.py", line 77, in __init__
self.databaseCrosses, self.databaseCrossIds= self.cursor.fetchall()[0]
IndexError: tuple index out of range
Bug Report
Traceback (most recent call last):
File "/node_apps/www/webqtl/main.py", line 162, in ?
page = SearchResultPage(fd)
File "/node_apps/www/cgi-bin/searchPage.py", line 77, in __init__
self.databaseCrosses, self.databaseCrossIds= self.cursor.fetchall()[0]
IndexError: tuple index out of range
Bug Report
Traceback (most recent call last):
File "/node_apps/www/webqtl/main.py", line 162, in ?
page = SearchResultPage(fd)
File "/node_apps/www/cgi-bin/searchPage.py", line 77, in __init__
self.databaseCrosses, self.databaseCrossIds= self.cursor.fetchall()[0]
IndexError: tuple index out of range
Bug Report
Traceback (most recent call last):
File "/node_apps/www/webqtl/main.py", line 303, in ?
page = cmdCorrelation(fd)
File "/node_apps/www/cgi-bin/TextUI.py", line 433, in __init__
self.readDB()
File "/node_apps/www/cgi-bin/TextUI.py", line 555, in readDB
self.cursor.execute(query)
File "/usr/lib/python2.3/site-packages/MySQLdb/cursors.py", line 137, in execute
self.errorhandler(self, exc, value)
File "/usr/lib/python2.3/site-packages/MySQLdb/connections.py", line 33, in defaulterrorhandler
raise errorclass, errorvalue
OperationalError: (1054, "Unknown column 'LocusID' in 'field list'")
Bug Report
Traceback (most recent call last):
File "/node_apps/www/webqtl/main.py", line 303, in ?
page = cmdCorrelation(fd)
File "/node_apps/www/cgi-bin/TextUI.py", line 433, in __init__
self.readDB()
File "/node_apps/www/cgi-bin/TextUI.py", line 555, in readDB
self.cursor.execute(query)
File "/usr/lib/python2.3/site-packages/MySQLdb/cursors.py", line 137, in execute
self.errorhandler(self, exc, value)
File "/usr/lib/python2.3/site-packages/MySQLdb/connections.py", line 33, in defaulterrorhandler
raise errorclass, errorvalue
OperationalError: (1054, "Unknown column 'LocusID' in 'field list'")
Bug Report
Traceback (most recent call last):
File "/node_apps/www/webqtl/main.py", line 303, in ?
page = cmdCorrelation(fd)
File "/node_apps/www/cgi-bin/TextUI.py", line 433, in __init__
self.readDB()
File "/node_apps/www/cgi-bin/TextUI.py", line 555, in readDB
self.cursor.execute(query)
File "/usr/lib/python2.3/site-packages/MySQLdb/cursors.py", line 137, in execute
self.errorhandler(self, exc, value)
File "/usr/lib/python2.3/site-packages/MySQLdb/connections.py", line 33, in defaulterrorhandler
raise errorclass, errorvalue
OperationalError: (1054, "Unknown column 'LocusID' in 'field list'")
Bug Report
Traceback (most recent call last):
File "/node_apps/www/webqtl/main.py", line 303, in ?
page = cmdCorrelation(fd)
File "/node_apps/www/cgi-bin/TextUI.py", line 433, in __init__
self.readDB()
File "/node_apps/www/cgi-bin/TextUI.py", line 555, in readDB
self.cursor.execute(query)
File "/usr/lib/python2.3/site-packages/MySQLdb/cursors.py", line 137, in execute
self.errorhandler(self, exc, value)
File "/usr/lib/python2.3/site-packages/MySQLdb/connections.py", line 33, in defaulterrorhandler
raise errorclass, errorvalue
OperationalError: (1054, "Unknown column 'LocusID' in 'field list'")
Bug Report
Traceback (most recent call last):
File "/node_apps/www/webqtl/main.py", line 303, in ?
page = cmdCorrelation(fd)
File "/node_apps/www/cgi-bin/TextUI.py", line 433, in __init__
self.readDB()
File "/node_apps/www/cgi-bin/TextUI.py", line 555, in readDB
self.cursor.execute(query)
File "/usr/lib/python2.3/site-packages/MySQLdb/cursors.py", line 137, in execute
self.errorhandler(self, exc, value)
File "/usr/lib/python2.3/site-packages/MySQLdb/connections.py", line 33, in defaulterrorhandler
raise errorclass, errorvalue
OperationalError: (1054, "Unknown column 'LocusID' in 'field list'")
Bug Report
Traceback (most recent call last):
File "/node_apps/www/webqtl/main.py", line 303, in ?
page = cmdCorrelation(fd)
File "/node_apps/www/cgi-bin/TextUI.py", line 433, in __init__
self.readDB()
File "/node_apps/www/cgi-bin/TextUI.py", line 555, in readDB
self.cursor.execute(query)
File "/usr/lib/python2.3/site-packages/MySQLdb/cursors.py", line 137, in execute
self.errorhandler(self, exc, value)
File "/usr/lib/python2.3/site-packages/MySQLdb/connections.py", line 33, in defaulterrorhandler
raise errorclass, errorvalue
OperationalError: (1054, "Unknown column 'LocusID' in 'field list'")
Bug Report
Traceback (most recent call last):
File "/node_apps/www/webqtl/main.py", line 303, in ?
page = cmdCorrelation(fd)
File "/node_apps/www/cgi-bin/TextUI.py", line 433, in __init__
self.readDB()
File "/node_apps/www/cgi-bin/TextUI.py", line 566, in readDB
self.cursor.execute(query)
File "/usr/lib/python2.3/site-packages/MySQLdb/cursors.py", line 137, in execute
self.errorhandler(self, exc, value)
File "/usr/lib/python2.3/site-packages/MySQLdb/connections.py", line 33, in defaulterrorhandler
raise errorclass, errorvalue
OperationalError: (1054, "Unknown column 'LocusID' in 'field list'")
Bug Report
Traceback (most recent call last):
File "/node_apps/www/webqtl/main.py", line 303, in ?
page = cmdCorrelation(fd)
File "/node_apps/www/cgi-bin/TextUI.py", line 433, in __init__
self.readDB()
File "/node_apps/www/cgi-bin/TextUI.py", line 555, in readDB
self.cursor.execute(query)
File "/usr/lib/python2.3/site-packages/MySQLdb/cursors.py", line 137, in execute
self.errorhandler(self, exc, value)
File "/usr/lib/python2.3/site-packages/MySQLdb/connections.py", line 33, in defaulterrorhandler
raise errorclass, errorvalue
OperationalError: (1054, "Unknown column 'LocusID' in 'field list'")
Bug Report
Traceback (most recent call last):
File "/node_apps/www/webqtl/main.py", line 303, in ?
page = cmdCorrelation(fd)
File "/node_apps/www/cgi-bin/TextUI.py", line 433, in __init__
self.readDB()
File "/node_apps/www/cgi-bin/TextUI.py", line 555, in readDB
self.cursor.execute(query)
File "/usr/lib/python2.3/site-packages/MySQLdb/cursors.py", line 137, in execute
self.errorhandler(self, exc, value)
File "/usr/lib/python2.3/site-packages/MySQLdb/connections.py", line 33, in defaulterrorhandler
raise errorclass, errorvalue
OperationalError: (1054, "Unknown column 'LocusID' in 'field list'")
Bug Report
Traceback (most recent call last):
File "./cmdLine.py", line 112, in ?
page = ClusterTreePage(fd)
File "/node_apps/www/cgi-bin/correlationPage.py", line 1148, in __init__
qtlresult = fd.genotype.regression(strains = _strains, trait = _vals)
IndexError: the length of the strain list and the value list are different,
or they are less than 8
Bug Report
Traceback (most recent call last):
File "./cmdLine.py", line 120, in ?
page = MultipleIntMappingPage(fd)
File "/node_apps/www/cgi-bin/intervalPage.py", line 2733, in __init__
IntMappingPage.__init__(self,fd)
File "/node_apps/www/cgi-bin/intervalPage.py", line 228, in __init__
LRSArray = _genotype.permutation(strains = _strains, trait = _vals, nperm=fd.nperm)
IndexError: the length of the strain list and the value list are different,
or they are less than 8
Bug Report
Traceback (most recent call last):
File "./cmdLine.py", line 120, in ?
page = MultipleIntMappingPage(fd)
File "/node_apps/www/cgi-bin/intervalPage.py", line 2733, in __init__
IntMappingPage.__init__(self,fd)
File "/node_apps/www/cgi-bin/intervalPage.py", line 358, in __init__
gifmap = self.plotIntMapping(intCanvas, _LRSResult, _bootResult, fd, offset = (75, 120, 80, 10))
File "/node_apps/www/cgi-bin/intervalPage.py", line 2374, in plotIntMapping
additiveStep = (additiveScale[1]-additiveScale[0])/additiveScale[2]
TypeError: unsubscriptable object
Bug Report
Traceback (most recent call last):
File "./cmdLine.py", line 120, in ?
page = MultipleIntMappingPage(fd)
File "/node_apps/www/cgi-bin/intervalPage.py", line 2733, in __init__
IntMappingPage.__init__(self,fd)
File "/node_apps/www/cgi-bin/intervalPage.py", line 358, in __init__
gifmap = self.plotIntMapping(intCanvas, _LRSResult, _bootResult, fd, offset = (75, 120, 80, 10))
File "/node_apps/www/cgi-bin/intervalPage.py", line 2374, in plotIntMapping
additiveStep = (additiveScale[1]-additiveScale[0])/additiveScale[2]
TypeError: unsubscriptable object
Bug Report
Traceback (most recent call last):
File "./cmdLine.py", line 120, in ?
page = MultipleIntMappingPage(fd)
File "/node_apps/www/cgi-bin/intervalPage.py", line 2733, in __init__
IntMappingPage.__init__(self,fd)
File "/node_apps/www/cgi-bin/intervalPage.py", line 358, in __init__
gifmap = self.plotIntMapping(intCanvas, _LRSResult, _bootResult, fd, offset = (75, 120, 80, 10))
File "/node_apps/www/cgi-bin/intervalPage.py", line 2374, in plotIntMapping
additiveStep = (additiveScale[1]-additiveScale[0])/additiveScale[2]
TypeError: unsubscriptable object
Bug Report
Traceback (most recent call last):
File "./cmdLine.py", line 120, in ?
page = MultipleIntMappingPage(fd)
File "/node_apps/www/cgi-bin/intervalPage.py", line 2733, in __init__
IntMappingPage.__init__(self,fd)
File "/node_apps/www/cgi-bin/intervalPage.py", line 358, in __init__
gifmap = self.plotIntMapping(intCanvas, _LRSResult, _bootResult, fd, offset = (75, 120, 80, 10))
File "/node_apps/www/cgi-bin/intervalPage.py", line 2374, in plotIntMapping
additiveStep = (additiveScale[1]-additiveScale[0])/additiveScale[2]
TypeError: unsubscriptable object
Bug Report
Traceback (most recent call last):
File "./cmdLine.py", line 120, in ?
page = MultipleIntMappingPage(fd)
File "/node_apps/www/cgi-bin/intervalPage.py", line 2733, in __init__
IntMappingPage.__init__(self,fd)
File "/node_apps/www/cgi-bin/intervalPage.py", line 358, in __init__
gifmap = self.plotIntMapping(intCanvas, _LRSResult, _bootResult, fd, offset = (75, 120, 80, 10))
File "/node_apps/www/cgi-bin/intervalPage.py", line 2374, in plotIntMapping
additiveStep = (additiveScale[1]-additiveScale[0])/additiveScale[2]
TypeError: unsubscriptable object
Bug Report
Traceback (most recent call last):
File "/node_apps/www/webqtl/main.py", line 136, in ?
page = editHtmlPage(fd)
File "/node_apps/www/cgi-bin/upddataPage.py", line 1060, in __init__
fp = open(fileName, 'wb')
IOError: [Errno 13] Permission denied: '/node_apps/www/html/webqtl//dbdoc/HC_M2_1005_P.html'
Bug Report
Traceback (most recent call last):
File "/home/hqli/public_html/cgi-bin/beta/main.py", line 162, in ?
page = SearchResultPage(fd)
File "/home/hqli/public_html/cgi-bin/beta/searchPage.py", line 56, in __init__
indId, indName, indFullName, indConfid = self.cursor.fetchall()[0]
IndexError: tuple index out of range
Bug Report
Traceback (most recent call last):
File "/node_apps/www/webqtl/main.py", line 162, in ?
page = SearchResultPage(fd)
File "/node_apps/www/cgi-bin/searchPage.py", line 56, in __init__
indId, indName, indFullName, indConfid = self.cursor.fetchall()[0]
IndexError: tuple index out of range
Bug Report
Traceback (most recent call last):
File "/home/hqli/public_html/cgi-bin/beta/main.py", line 162, in ?
page = SearchResultPage(fd)
File "/home/hqli/public_html/cgi-bin/beta/searchPage.py", line 56, in __init__
indId, indName, indFullName, indConfid = self.cursor.fetchall()[0]
IndexError: tuple index out of range
Bug Report
Traceback (most recent call last):
File "/home/hqli/public_html/cgi-bin/beta/main.py", line 162, in ?
page = SearchResultPage(fd)
File "/home/hqli/public_html/cgi-bin/beta/searchPage.py", line 56, in __init__
indId, indName, indFullName, indConfid = self.cursor.fetchall()[0]
IndexError: tuple index out of range
Bug Report
Traceback (most recent call last):
File "/home/hqli/public_html/cgi-bin/beta/main.py", line 162, in ?
page = SearchResultPage(fd)
File "/home/hqli/public_html/cgi-bin/beta/searchPage.py", line 56, in __init__
indId, indName, indFullName, indConfid = self.cursor.fetchall()[0]
IndexError: tuple index out of range
Bug Report
Traceback (most recent call last):
File "/home/hqli/public_html/cgi-bin/beta/main.py", line 162, in ?
page = SearchResultPage(fd)
File "/home/hqli/public_html/cgi-bin/beta/searchPage.py", line 56, in __init__
indId, indName, indFullName, indConfid = self.cursor.fetchall()[0]
IndexError: tuple index out of range
Bug Report
Traceback (most recent call last):
File "/home/hqli/public_html/cgi-bin/beta/main.py", line 162, in ?
page = SearchResultPage(fd)
File "/home/hqli/public_html/cgi-bin/beta/searchPage.py", line 57, in __init__
indId, indName, indFullName, indConfid = self.cursor.fetchall()[0]
IndexError: tuple index out of range
Bug Report
Traceback (most recent call last):
File "/home/hqli/public_html/cgi-bin/beta/main.py", line 162, in ?
page = SearchResultPage(fd)
File "/home/hqli/public_html/cgi-bin/beta/searchPage.py", line 57, in __init__
indId, indName, indFullName, indConfid = self.cursor.fetchall()[0]
IndexError: tuple index out of range
Bug Report
Traceback (most recent call last):
File "/node_apps/www/webqtl/main.py", line 162, in ?
page = SearchResultPage(fd)
File "/node_apps/www/cgi-bin/searchPage.py", line 56, in __init__
indId, indName, indFullName, indConfid = self.cursor.fetchall()[0]
IndexError: tuple index out of range
Bug Report
Traceback (most recent call last):
File "./cmdLine.py", line 120, in ?
page = MultipleIntMappingPage(fd)
File "/node_apps/www/cgi-bin/intervalPage.py", line 2733, in __init__
IntMappingPage.__init__(self,fd)
File "/node_apps/www/cgi-bin/intervalPage.py", line 519, in __init__
mainAreas = self.plotIntMappingALEX_TEST(intCanvas, _LRSResult, _bootResult, fd, geneTable=geneTableMain, offset= (self.WIDTH_LEFT_OFFSET_DEFAULT, self.WIDTH_RIGHT_OFFSET_DEFAULT, self.HEIGHT_TOP_OFFSET_DEFAULT, self.HEIGHT_BOTTOM_OFFSET_DEFAULT), zoom = 1)
File "/node_apps/www/cgi-bin/intervalPage.py", line 1786, in plotIntMappingALEX_TEST
geneCol.loadGenesOnChr(chrName, self.cursor, self.diffCol, self.startMb, self.endMb, fd.identification)
File "/node_apps/www/cgi-bin/GeneCollection.py", line 88, in loadGenesOnChr
cursor.execute("SELECT count(id) FROM SNP_perlegen where mb > %f and mb < %f and chr = '%s' and %s=1" % (gene[4]-0.002, gene[5]+0.002, tempChr, diffCol))
File "/usr/lib/python2.3/site-packages/MySQLdb/cursors.py", line 137, in execute
self.errorhandler(self, exc, value)
File "/usr/lib/python2.3/site-packages/MySQLdb/connections.py", line 33, in defaulterrorhandler
raise errorclass, errorvalue
ProgrammingError: (1146, "Table 'db_webqtl.SNP_perlegen' doesn't exist")
Bug Report
Traceback (most recent call last):
File "./cmdLine.py", line 120, in ?
page = MultipleIntMappingPage(fd)
File "/node_apps/www/cgi-bin/intervalPage.py", line 2733, in __init__
IntMappingPage.__init__(self,fd)
File "/node_apps/www/cgi-bin/intervalPage.py", line 519, in __init__
mainAreas = self.plotIntMappingALEX_TEST(intCanvas, _LRSResult, _bootResult, fd, geneTable=geneTableMain, offset= (self.WIDTH_LEFT_OFFSET_DEFAULT, self.WIDTH_RIGHT_OFFSET_DEFAULT, self.HEIGHT_TOP_OFFSET_DEFAULT, self.HEIGHT_BOTTOM_OFFSET_DEFAULT), zoom = 1)
File "/node_apps/www/cgi-bin/intervalPage.py", line 1786, in plotIntMappingALEX_TEST
geneCol.loadGenesOnChr(chrName, self.cursor, self.diffCol, self.startMb, self.endMb, fd.identification)
File "/node_apps/www/cgi-bin/GeneCollection.py", line 88, in loadGenesOnChr
cursor.execute("SELECT count(id) FROM SNP_perlegen where mb > %f and mb < %f and chr = '%s' and %s=1" % (gene[4]-0.002, gene[5]+0.002, tempChr, diffCol))
File "/usr/lib/python2.3/site-packages/MySQLdb/cursors.py", line 137, in execute
self.errorhandler(self, exc, value)
File "/usr/lib/python2.3/site-packages/MySQLdb/connections.py", line 33, in defaulterrorhandler
raise errorclass, errorvalue
ProgrammingError: (1146, "Table 'db_webqtl.SNP_perlegen' doesn't exist")
Bug Report
Traceback (most recent call last):
File "./cmdLine.py", line 120, in ?
page = MultipleIntMappingPage(fd)
File "/node_apps/www/cgi-bin/intervalPage.py", line 2733, in __init__
IntMappingPage.__init__(self,fd)
File "/node_apps/www/cgi-bin/intervalPage.py", line 519, in __init__
mainAreas = self.plotIntMappingALEX_TEST(intCanvas, _LRSResult, _bootResult, fd, geneTable=geneTableMain, offset= (self.WIDTH_LEFT_OFFSET_DEFAULT, self.WIDTH_RIGHT_OFFSET_DEFAULT, self.HEIGHT_TOP_OFFSET_DEFAULT, self.HEIGHT_BOTTOM_OFFSET_DEFAULT), zoom = 1)
File "/node_apps/www/cgi-bin/intervalPage.py", line 1786, in plotIntMappingALEX_TEST
geneCol.loadGenesOnChr(chrName, self.cursor, self.diffCol, self.startMb, self.endMb, fd.identification)
File "/node_apps/www/cgi-bin/GeneCollection.py", line 88, in loadGenesOnChr
cursor.execute("SELECT count(id) FROM SNP_perlegen where mb > %f and mb < %f and chr = '%s' and %s=1" % (gene[4]-0.002, gene[5]+0.002, tempChr, diffCol))
File "/usr/lib/python2.3/site-packages/MySQLdb/cursors.py", line 137, in execute
self.errorhandler(self, exc, value)
File "/usr/lib/python2.3/site-packages/MySQLdb/connections.py", line 33, in defaulterrorhandler
raise errorclass, errorvalue
ProgrammingError: (1146, "Table 'db_webqtl.SNP_perlegen' doesn't exist")