{% extends "base.html" %}
{% block title %}WCGNA results{% endblock %}

{% block content %} <!-- Start of body -->
  <div class="container">
    <h1>WGCNA Results</h1>
    Analysis found {{results['nmod']}} modules when scanning {{results['nphe']}} phenotypes, measured on {{results['nstr']}} strains.<br>
    Additional parameters settings:
    <ul>
      <li>Soft thresholds checked = {{results['requestform']['SoftThresholds']}}</li>
      <li>Power used for this analysis = {{results['Power']}}</li>
      <li>TomType = {{results['requestform']['TOMtype']}}</li>
      <li>Minimum module size = {{results['requestform']['MinModuleSize'] }}</li>
      <li>mergeCutHeight = {{results['requestform']['mergeCutHeight'] }}</li>
    </ul>

    <h3>Soft threshold table</h3>
    <table width="80%">
      <tr><th>Power</th><th>SFT.R.sq</th><th>slope</th><th>truncated.R.sq</th><th>mean.k</th><th>median.k</th><th>max.k</th><th>Analysis</th></tr>
      {% for r in range(powers[0][0]|length) %}
        {% if powers[0][1][r] > 0.85 %}
        <tr style="color: #00ff00;">
        {% elif powers[0][1][r] > 0.75 %}
        <tr style="color: #aaaa00;">
        {% else %}
        <tr style="color: #ff0000;">
        {% endif %}
        {% for c in range(powers[0]|length) %}
        <td>{{powers[0][c][r]|round(3)}}</td>
       {% endfor %}
        <td style="color: #000000;">
          {% if powers[0][1][r] > 0.75 %}
          <input type="submit" value="Redo use power = {{powers[0][0][r]}}" /></td>
          {% endif %}
        </tr>
    {% endfor %}
    </table>
    <h3>WGCNA module plot</h3>
                <a href="/tmp/{{ results['imgurl'] }}">
                    <img alt="Embedded Image" src="data:image/png;base64,
                    {% for elem in results['imgdata'] -%}
                    {% print("%c"|format(elem)) %}
                    {%- endfor %}
                    " /></a>


    <h3>Phenotype / Module table</h3>
    <table width="80%">
      <tr><th>Phenotype</th><th>Module</th></tr>
      {% for r in range(results['nphe']) %}
        <tr>
          <td>{{results['phenotypes'][r][0]}}</td>
          <td>{{results['network'][0][r]}}</td>
        </tr>
    {% endfor %}
    </table>

    <h3>Module eigen genes</h3>
    <table width="80%">
      <tr><th>Phenotype</th>
      {% for m in range(results['nmod']) %}
        <th><input type="submit" value="Add module {{m}} to collection" /></th>
      {% endfor %}
      </tr>
      {% for r in range(results['nstr']) %}
        <tr>
          <td>{{results['strains'][r][0]}}</td>
          {% for m in range(results['nmod']) %}
          <td>{{results['network'][2][m][r]}}</td>
          {% endfor %}
        </tr>
    {% endfor %}
    </table>
  </div>
{% endblock %}