{% extends "index_page.html" %}
{% block title %}View Collection{% endblock %}
{% block css %}
    <link rel="stylesheet" type="text/css" href="{{ url_for('css', filename='DataTables/css/jquery.dataTables.css') }}" />
    <link rel="stylesheet" type="text/css" href="{{ url_for('js', filename='DataTablesExtensions/buttonStyles/css/buttons.dataTables.min.css') }}">
    <link rel="stylesheet" type="text/css" href="{{ url_for('css', filename='jquery-ui/jquery-ui.theme.css') }}"/>
    <link rel="stylesheet" type="text/css" href="/static/new/css/show_trait.css" />
    <link rel="stylesheet" type="text/css" href="/static/new/css/trait_list.css" />
{% endblock %}
{% block content %}
<!-- Start of body -->

    <div class="container">
      {{flash_me()}}
        <h1>
            <span id="collection_name">{{ uc.name }}</span>
            <form id="frm-change-collection-name"
		  method="POST"
		  action="{{url_for('change_collection_name')}}"
		  style="display:inline;">
	      <input type="hidden" name="collection_id" value="{{uc.id}}" />
	      <input type="text"
		     name="new_collection_name"
		     style="font-size: 20px; display: none; width: 500px;"
		     class="form-control"
		     placeholder="{{ uc.name }}" />
	    </form>
            <button class="btn btn-default" style="display: inline;" id="change_collection_name">Change Collection Name</button>
            <button class="btn btn-default" style="display: inline;" id="make_default">Make Default</button>
        </h1>
        <h3>This collection has {{ '{}'.format(numify(trait_obs|count, "record", "records")) }}</h3>

        <div class="tool-button-container">
          <form id="collection_form" action="/loading" method="post">
            <input type="hidden" name="uc_id" id="uc_id" value="{{ uc.id }}" />
            <input type="hidden" name="collection_name" id="collection_name" value="{{ uc.name }}" />
            <input type="hidden" name="tool_used" value="" />
            <input type="hidden" name="form_url" value="" />
            <input type="hidden" name="trait_list" id="trait_list" value= "
            {% for this_trait in trait_obs %}
                {{ this_trait.name }}:{{ this_trait.dataset.name }}:{{ data_hmac('{}:{}'.format(this_trait.name, this_trait.dataset.name)) }},
            {% endfor %}" >

            {% include 'tool_buttons.html' %}

          </form>
        </div>
        <div style="display: flex;">
            <form id="heatmaps_form">
                <button id="clustered-heatmap"
                    class="btn btn-primary"
                    data-url="{{heatmap_data_url}}"
                    title="Generate heatmap from this collection" style="margin-top: 10px; margin-bottom: 10px;">
                        Generate Heatmap
                </button>
                <br>
                <div id="heatmap-options" style="display: none;">
                    <div style="margin-bottom: 10px;">
                        <b>Heatmap Orientation: </b>
                        <br>
                        Vertical
                        <input id="heatmap-orient-vertical"
                                type="radio"
                                name="vertical"
                                value="true" checked="checked"/>
                        Horizontal
                        <input id="heatmap-orient-horizontal"
                                type="radio"
                                name="vertical"
                                value="false" />
                    </div>
                    <div style="margin-bottom: 10px;">
                        <button id="clear-heatmap"
                            class="btn btn-danger"
                            title="Clear Heatmap">
                            Clear Heatmap
                        </button>
                    </div>
                </div>
            </form>
            &nbsp;
        </div>

        <div>
            <div id="clustered-heatmap-image-area"></div>
            <br />
            <div class="collection-table-options">
                <form id="export_form" method="POST" action="/export_traits_csv">
                    <button class="btn btn-default" id="select_all" type="button"><span class="glyphicon glyphicon-ok"></span> Select All</button>
                    <button class="btn btn-default" id="invert" type="button"><span class="glyphicon glyphicon-ok"></span> Invert</button>
                    <button class="btn btn-success" id="add" type="button" disabled><i class="icon-plus-sign"></i> Copy</button>
                    <input type="hidden" name="database_name" id="database_name" value="None">
                    <input type="hidden" name="export_data" id="export_data" value="">
                    <input type="hidden" name="file_name" id="file_name" value="collection_table">
                    <input type="hidden" name="collection_name_export" value="{{ uc.name }}">
                    <input type="hidden" name="user_email_export" value="{% if g.user_session.user_email %}{{ g.user_session.user_email }}{% else %}N/A{% endif %}">
                    <button class="btn btn-default" id="export_traits">Download</button>
                    <button class="btn btn-default" id="export_collection">Export Collection</button>
                    <input type="text" id="searchbox" class="form-control" style="width: 200px; display: inline; padding-bottom: 9px;" placeholder="Search Table For ...">
                    <input type="text" id="select_top" class="form-control" style="width: 200px; display: inline; padding-bottom: 9px;" placeholder="Select Top ...">
                    <button class="btn btn-default" id="deselect_all" type="button"><span class="glyphicon glyphicon-remove"></span> Deselect</button>
                    <button id="remove" class="btn btn-danger" data-url="/collections/remove" type="button" disabled><i class="icon-minus-sign"></i> Remove</button>
                </form>
            </div>
            <div style="margin-top: 10px; margin-bottom: 5px;" class="show-hide-container">
                <b>Show/Hide Columns:&nbsp;&nbsp;</b>
                <button class="toggle-vis" data-column="1">Index</button>
                <button class="toggle-vis" data-column="2">Dataset</button>
                <button class="toggle-vis" data-column="3">Record</button>
                <button class="toggle-vis" data-column="4">Symbol</button>
                <button class="toggle-vis" data-column="5">Description</button>
                <button class="toggle-vis" data-column="6">Location</button>
                <button class="toggle-vis" data-column="7">Mean</button>
                <button class="toggle-vis" data-column="8">Peak -logP</button>
                <button class="toggle-vis" data-column="9">Peak Location</button>
                <button class="toggle-vis" data-column="10">Effect Size</button>
            </div>
            <div id="trait_table_container" style="width: 2000px; min-width: 1500px;">
                <table class="table-hover table-striped cell-border" id='trait_table' style="float: left;">
                    <tbody>
                        <td colspan="100%" align="center"><br><b><font size="15">Loading...</font></b><br></td>
                    </tbody>
                </table>
            </div>
            <br />
        </div>
    </div>

<!-- End of body -->

{% endblock %}

{% block js %}
    <script language="javascript" type="text/javascript" src="{{ url_for('js', filename='jszip/jszip.min.js') }}"></script>
    <script language="javascript" type="text/javascript" src="{{ url_for('js', filename='js_alt/md5.min.js') }}"></script>
    <script language="javascript" type="text/javascript" src="{{ url_for('js', filename='DataTables/js/jquery.dataTables.min.js') }}"></script>
    <script language="javascript" type="text/javascript" src="{{ url_for('js', filename='DataTablesExtensions/scroller/js/dataTables.scroller.min.js') }}"></script>
    <script language="javascript" type="text/javascript" src="{{ url_for('js', filename='DataTablesExtensions/plugins/sorting/natural.js') }}"></script>
    <script language="javascript" type="text/javascript" src="{{ url_for('js', filename='DataTablesExtensions/buttons/js/dataTables.buttons.min.js') }}"></script>
    <script language="javascript" type="text/javascript" src="{{ url_for('js', filename='DataTablesExtensions/buttons/js/buttons.colVis.min.js') }}"></script>
    <script type="text/javascript" src="/static/new/javascript/search_results.js"></script>
    <script type="text/javascript" src="/static/new/javascript/table_functions.js"></script>
    <script type="text/javascript" src="/static/new/javascript/create_datatable.js"></script>

    <script type="text/javascript" src="{{ url_for('js', filename='plotly/plotly.min.js') }}"></script>

    <script type="text/javascript"
	    src="/static/new/javascript/partial_correlations.js"></script>
    <script type='text/javascript'>
        var traitsJson = {{ traits_json|safe }};
    </script>
    <script language="javascript" type="text/javascript">
        $(document).ready( function () {

            tableId = "trait_table"

            columnDefs = [
                {
                    'data': null,
                    'width': "5px",
                    'orderDataType': "dom-checkbox",
                    'targets': 0,
                    'render': function(data) {
                        return '<input type="checkbox" name="searchResult" class="checkbox trait_checkbox" value="' + data.hmac + '" data-trait-info="' + data.trait_info_str + '">'
                    }
                },
                {
                    'title': "Index",
                    'type': "natural",
                    'width': "35px",
                    'searchable': false,
                    'orderable': false,
                    'targets': 1,
                    'render': function(data, type, row, meta) {
                        return meta.row
                    }
                },
                {
                    'title': "Dataset",
                    'type': "natural",
                    'targets': 2,
                    'data': "dataset"
                },
                {
                    'title': "Record",
                    'type': "natural-minus-na",
                    'width': "120px",
                    'targets': 3,
                    'data': null,
                    'render': function(data) {
                        return '<a target="_blank" href="/show_trait?trait_id=' + data.name + '&dataset=' + data.dataset + '">' + data.display_name + '</a>'
                    }
                },
                {
                    'title': "Symbol",
                    'type': "natural",
                    'targets': 4,
                    'data': null,
                    'render': function(data) {
                        if (Object.hasOwn(data, 'symbol')){
                            return data.symbol
                        } else if (Object.hasOwn(data, 'name')){
                            return data.name
                        } else {
                            return "N/A"
                        }
                    }
                },
                {
                    'title': "Description",
                    'type': "natural",
                    'targets': 5,
                    'data': null,
                    'render': function(data) {
                        if (Object.hasOwn(data, 'description')){
                            try {
                                return decodeURIComponent(data.description)
                            } catch(err){
                                return data.description
                            }
                        } else if (Object.hasOwn(data, 'location')){
                            return data.location
                        } else if (Object.hasOwn(data, 'name')){
                            return data.name
                        } else {
                            return "N/A"
                        }
                    }
                },
                {
                    'title': "<div style='text-align: right;'>Location</div>",
                    'type': "natural-minus-na",
                    'width': "125px",
                    'targets': 6,
                    'data': null,
                    'render': function(data) {
                        if (Object.hasOwn(data, 'location')){
                            return data.location
                        } else {
                            return "N/A"
                        }
                    }
                },
                {
                    'title': "<div style='text-align: right;'>Mean</div>",
                    'type': "natural-minus-na",
                    'width': "60px",
                    'data': null,
                    'targets': 7,
                    'orderSequence': [ "desc", "asc"],
                    'render': function(data) {
                        if (Object.hasOwn(data, 'mean')){
                            if (data.mean != 'N/A'){
                                return data.mean.toFixed(3)
                            } else {
                                return "N/A"
                            }
                        } else {
                            return "N/A"
                        }
                    }
                },
                {
                    'title': "<div style='text-align: right; padding-right: 10px;'>Peak</div> <div style='text-align: right;'>-logP <a href=\"{{ url_for('gn_docs_blueprint.glossary') }}#LRS\" target=\"_blank\" style=\"color: white;\"><sup style='color: #FF0000;'><i>?</i></sup></a></div>",
                    'type': "natural-minus-na",
                    'data': null,
                    'width': "60px",
                    'targets': 8,
                    'orderSequence': [ "desc", "asc"],
                    'render': function(data) {
                        if (Object.hasOwn(data, 'lrs_score')){
                            return (data.lrs_score / 4.61).toFixed(3)
                        } else {
                            return "N/A"
                        }
                    }
                },
                {
                    'title': "<div style='text-align: right;'>Peak Location</div>",
                    'type': "natural-minus-na",
                    'data': null,
                    'width': "125px",
                    'targets': 9,
                    'render': function(data) {
                        if (Object.hasOwn(data, 'lrs_location')){
                            return data.lrs_location
                        } else {
                            return "N/A"
                        }
                    }
                },
                {
                    'title': "<div style='text-align: right; padding-right: 10px;'>Effect</div> <div style='text-align: right;'>Size <a href=\"{{ url_for('gn_docs_blueprint.glossary') }}#A\" target=\"_blank\" style=\"color: white;\"><sup style='color: #FF0000;'><i>?</i></sup></a></div>",
                    'type': "natural-minus-na",
                    'data': null,
                    'width': "85px",
                    'targets': 10,
                    'orderSequence': [ "desc", "asc"],
                    'render': function(data) {
                        if (Object.hasOwn(data, 'additive')){
                            if (data.additive != "") {
                                return data.additive.toFixed(3)
                            } else {
                                return "N/A"
                            }
                        } else {
                            return "N/A"
                        }
                    }
                }
            ]

            tableSettings = {
                "createdRow": function ( row, data, index ) {
                    $('td', row).eq(0).attr("style", "text-align: center; padding: 0px 10px 2px 10px;");
                    $('td', row).eq(1).attr("align", "right");
                    $('td', row).eq(1).attr('data-export', index+1);
                    $('td', row).eq(2).attr('data-export', $('td', row).eq(2).text());
                    $('td', row).eq(3).attr('title', $('td', row).eq(3).text());
                    $('td', row).eq(3).attr('data-export', $('td', row).eq(3).text());
                    $('td', row).eq(4).attr('title', $('td', row).eq(4).text());
                    $('td', row).eq(4).attr('data-export', $('td', row).eq(4).text());
                    $('td', row).eq(5).attr('data-export', $('td', row).eq(5).text());
                    if ($('td', row).eq(5).text().length > 500) {
                        $('td', row).eq(5).text($('td', row).eq(5).text().substring(0, 500));
                        $('td', row).eq(5).text($('td', row).eq(5).text() + '...')
                    }
                    $('td', row).slice(6,11).attr("align", "right");
                    $('td', row).eq(6).attr('data-export', $('td', row).eq(6).text());
                    $('td', row).eq(7).attr('data-export', $('td', row).eq(7).text());
                    $('td', row).eq(8).attr('data-export', $('td', row).eq(8).text());
                    $('td', row).eq(9).attr('data-export', $('td', row).eq(9).text());
                    $('td', row).eq(10).attr('data-export', $('td', row).eq(9).text());
                },
                "order": [[1, "asc" ]],
                {% if traits_json|length > 20 %}
                "scroller": true
                {% else %}
                "scroller": false
                {% endif %}
            }

            create_table(tableId, traitsJson, columnDefs, tableSettings)

            submit_special = function(url) {
                $("#collection_form").attr("action", url);
                $("#collection_form").attr('target', '_blank').submit();
                return false;
            };

            $("#delete").on("click", function() {
                url = $(this).data("url")
                $("#collection_form").attr("action", url);
                return $("#collection_form").removeAttr('target').submit();
            });

            $("#remove").on("click", function() {
                url = $(this).data("url")
                traits = $("#trait_table input:checked").map(function() {
                    return $(this).val();
                }).get();
                $("#trait_list").val(traits)
                $("#collection_form").attr("action", url);
                return $("#collection_form").removeAttr('target').submit();
            });

            $("#change_collection_name").on("click", function() {
                if ($('input[name=new_collection_name]').css('display') == 'none') {
                    $('input[name=new_collection_name]').css('display', 'inline');
                    $('#collection_name').css('display', 'none');
                } else {
		    new_name = $('input[name=new_collection_name]').val();
		    $('#frm-change-collection-name').submit();
		    console.debug("We really should not get here, but, whatever...");
                    $('input[name=new_collection_name]').css('display', 'none');
                    $('input[name=collection_name]').val(new_name);
                    $('#collection_name').text(new_name)
                    $('#collection_name').css('display', 'inline');
                }
            });

            make_default = function() {
                alert("The current collection is now your default collection.")
                let uc_id = $('#uc_id').val();
                $.cookie('default_collection', uc_id, {
                    expires: 365,
                    path: '/'
                });

                let default_collection_id = $.cookie('default_collection');
            };

            $("#make_default").on("click", function(){
                make_default();
            });

	    $("#heatmaps_form").submit(function(e) {
		e.preventDefault();
	    });

	    function clear_heatmap_area() {
		area = document.getElementById("clustered-heatmap-image-area");
		area.querySelectorAll("*").forEach(function(child) {
		    child.remove();
		});
	    }

	    function generate_progress_indicator() {
		count = 0;
		default_message = "Computing"
		return function() {
		    message = default_message;
		    if(count >= 10) {
			count = 0;
		    }
		    for(i = 0; i < count; i++) {
			message = message + " .";
		    }
		    clear_heatmap_area();
		    $("#clustered-heatmap-image-area").append(
			'<div class="alert alert-info"' +
			    ' style="font-weigh: bold; font-size: 150%;">' +
			    message + '</div>');
		    count = count + 1;
		};
	    }

	    function display_clustered_heatmap(heatmap_data) {
		clear_heatmap_area();
		image_area = document.getElementById("clustered-heatmap-image-area")
		Plotly.newPlot(image_area, heatmap_data)
	    }

	    function process_clustered_heatmap_error(xhr, status, error) {
		clear_heatmap_area()
		$("#clustered-heatmap-image-area").append(
		    $(
			'<div class="alert alert-danger">ERROR: ' +
			    xhr.responseJSON.message +
			    '</div>'));
	    }

	    $("#clustered-heatmap").on("click", function() {
		clear_heatmap_area();
        $("#heatmap-options").show();
		intv = window.setInterval(generate_progress_indicator(), 300);
		vert_element = document.getElementById("heatmap-orient-vertical");
		vert_true = vert_element == null ? false : vert_element.checked;
		heatmap_url = $(this).attr("data-url")
		traits = $(".trait_checkbox:checked").map(function() {
		    return this.value
		}).get();
		$.ajax({
		    type: "POST",
		    url: heatmap_url,
		    contentType: "application/json",
		    data: JSON.stringify({
			"traits_names": traits,
			"vertical": vert_true
		    }),
		    dataType: "JSON",
		    success: function(data, status, xhr) {
			window.clearInterval(intv);
			display_clustered_heatmap(data);
		    },
		    error: function(xhr, status, error) {
			window.clearInterval(intv);
			process_clustered_heatmap_error(xhr, status, error);
		    }
		});
	    });

        $("#clear-heatmap").on("click", function() {
            clear_heatmap_area();
            $("#heatmap-options").hide();
        });

        });
    </script>


{% endblock %}