"""Entry point for flask app""" # pylint: disable=C0413,E0611 import os import sys import time import logging import datetime from typing import Tuple from pathlib import Path from urllib.parse import urljoin, urlparse import redis import jinja2 from flask_session import Session from authlib.jose import JsonWebKey from flask import g, Flask, flash, session, url_for, redirect, current_app from gn2.utility import formatting from gn3.authentication import DataRole, AdminRole from gn2.wqflask.group_manager import group_management from gn2.wqflask.resource_manager import resource_management from gn2.wqflask.metadata_edits import metadata_edit from gn2.wqflask.edit import metadata from gn2.wqflask.api.markdown import glossary_blueprint from gn2.wqflask.api.markdown import references_blueprint from gn2.wqflask.api.markdown import links_blueprint from gn2.wqflask.api.markdown import policies_blueprint from gn2.wqflask.api.markdown import environments_blueprint from gn2.wqflask.api.markdown import facilities_blueprint from gn2.wqflask.api.markdown import blogs_blueprint from gn2.wqflask.api.markdown import news_blueprint from gn2.wqflask.api.markdown import xapian_syntax_blueprint from gn2.wqflask.api.markdown import gn_docs_blueprint from gn2.wqflask.api.jobs import jobs as jobs_bp from gn2.wqflask.oauth2.routes import oauth2 from gn2.wqflask.oauth2.client import user_logged_in from gn2.wqflask.oauth2.collections import num_collections from gn2.wqflask.oauth2.request_utils import user_details, authserver_authorise_uri from gn2.wqflask.jupyter_notebooks import jupyter_notebooks from gn2.wqflask.startup import ( StartupError, startup_errors, check_mandatory_configs) def numcoll(): """Handle possible errors.""" try: return num_collections() except Exception as _exc: return "ERROR" def dev_loggers(appl: Flask) -> None: """Default development logging.""" formatter = logging.Formatter( fmt="[%(asctime)s] %(levelname)s [%(thread)d -- %(threadName)s] in %(module)s: %(message)s") stderr_handler = logging.StreamHandler(stream=sys.stderr) stderr_handler.setFormatter(formatter) appl.logger.addHandler(stderr_handler) root_logger = logging.getLogger() root_logger.addHandler(stderr_handler) root_logger.setLevel(appl.config.get("LOG_LEVEL", "WARNING")) def gunicorn_loggers(appl: Flask) -> None: """Logging with gunicorn WSGI server.""" logger = logging.getLogger("gunicorn.error") appl.logger.handlers = logger.handlers appl.logger.setLevel(logger.level) def setup_logging(appl: Flask) -> None: """Setup appropriate logging""" software, *_version_and_comments = os.environ.get( "SERVER_SOFTWARE", "").split('/') gunicorn_loggers(app) if software == "gunicorn" else dev_loggers(app) app = Flask(__name__) ## BEGIN: Setup configurations ## # See http://flask.pocoo.org/docs/config/#configuring-from-files # Note no longer use the badly named WQFLASK_OVERRIDES (nyi) app.config.from_object('gn2.default_settings') app.config.from_envvar('GN2_SETTINGS') app.config["SESSION_REDIS"] = redis.from_url(app.config["REDIS_URL"]) # BEGIN: SECRETS -- Should be the last of the settings to load secrets_file = Path(app.config.get("GN2_SECRETS", "")).absolute() if secrets_file.exists() and secrets_file.is_file(): app.config.from_pyfile(str(secrets_file)) # END: SECRETS ## END: Setup configurations ## setup_logging(app) ### DO NOT USE logging BEFORE THIS POINT!!!! ### app.jinja_env.globals.update( undefined=jinja2.StrictUndefined, numify=formatting.numify, logged_in=user_logged_in, authserver_authorise_uri=authserver_authorise_uri, user_details=user_details, num_collections=numcoll, datetime=datetime) # Registering blueprints app.register_blueprint(gn_docs_blueprint, url_prefix="/gn-docs") app.register_blueprint(glossary_blueprint, url_prefix="/glossary") app.register_blueprint(references_blueprint, url_prefix="/references") app.register_blueprint(links_blueprint, url_prefix="/links") app.register_blueprint(policies_blueprint, url_prefix="/policies") app.register_blueprint(environments_blueprint, url_prefix="/environments") app.register_blueprint(facilities_blueprint, url_prefix="/facilities") app.register_blueprint(blogs_blueprint, url_prefix="/blogs") app.register_blueprint(news_blueprint, url_prefix="/news") app.register_blueprint(xapian_syntax_blueprint, url_prefix="/search-syntax") app.register_blueprint(jupyter_notebooks, url_prefix="/jupyter_notebooks") app.register_blueprint(resource_management, url_prefix="/resource-management") app.register_blueprint(metadata_edit, url_prefix="/datasets/") app.register_blueprint(metadata, url_prefix="/metadata/") app.register_blueprint(group_management, url_prefix="/group-management") app.register_blueprint(jobs_bp, url_prefix="/jobs") app.register_blueprint(oauth2, url_prefix="/oauth2") from gn2.wqflask.app_errors import register_error_handlers register_error_handlers(app) try: check_mandatory_configs(app) except StartupError as serr: app.startup_error = serr app.register_blueprint(startup_errors, url_prefix="/") server_session = Session(app) @app.before_request def before_request(): g.request_start_time = time.time() g.request_time = lambda: "%.5fs" % (time.time() - g.request_start_time) @app.context_processor def include_admin_role_class(): return {'AdminRole': AdminRole} @app.context_processor def include_data_role_class(): return {'DataRole': DataRole}