From e615b83d34bcc991e671241db71c6ad0c0267479 Mon Sep 17 00:00:00 2001
From: Pjotr Prins
Date: Tue, 17 Mar 2015 17:15:56 +0300
Subject: Release 0.50-gn2-pre1

---
 wqflask/wqflask/my_pylmm/README.md | 22 +++++++++++++++++-----
 1 file changed, 17 insertions(+), 5 deletions(-)

(limited to 'wqflask')

diff --git a/wqflask/wqflask/my_pylmm/README.md b/wqflask/wqflask/my_pylmm/README.md
index 0c809610..f6b0e72d 100644
--- a/wqflask/wqflask/my_pylmm/README.md
+++ b/wqflask/wqflask/my_pylmm/README.md
@@ -1,9 +1,21 @@
 # RELEASE NOTES
 
-## 0.50-gn2-pre1
+## 0.50-gn2-pre1 release
+
+This is the first test release of multi-core pylmm into GN2. Both
+kinship calculation and GWAS have been made multi-threaded by
+introducing the Python multiprocessing module. Note that only
+run_other has been updated to use the new routines (so human is still
+handled the old way). I have taken care that we can still run both
+old-style and new-style LMM (through passing the 'new_code'
+boolean). This could be an option in the web server for users to
+select and test for any unexpected differences (of which there should
+be none, naturally ;).
+
+The current version can handle missing phenotypes, but as they are
+removed there is no way for GN2 to know what SNPs the P-values belong
+to. A future version will pass a SNP index to allow for missing
+phenotypes.
+
 
-1. This is the first test release of multi-core pylmm into GN2. Both
-   Kinship K calculation and GWAS have been made multi-threaded by
-   introducing the Python multiprocessing module. Note that only
-   run_other has been updated to use the new routines.
   
\ No newline at end of file
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