From aab6393dd60872a6a3b6e7db2a7c087c4ec41295 Mon Sep 17 00:00:00 2001
From: Alexander Kabui
Date: Mon, 15 Nov 2021 18:18:03 +0300
Subject: fetch only strains from the primary datasets

---
 wqflask/wqflask/correlation/pre_computes.py | 11 +++++++----
 1 file changed, 7 insertions(+), 4 deletions(-)

(limited to 'wqflask')

diff --git a/wqflask/wqflask/correlation/pre_computes.py b/wqflask/wqflask/correlation/pre_computes.py
index d8629706..355701f2 100644
--- a/wqflask/wqflask/correlation/pre_computes.py
+++ b/wqflask/wqflask/correlation/pre_computes.py
@@ -86,7 +86,6 @@ def fetch_precompute_results(base_dataset_name, target_dataset_name, dataset_typ
 
     file_path = os.path.join(TMPDIR, f"{file_name}.json")
 
-    results = None
 
     try:
         with open(file_path, "r+") as json_handler:
@@ -130,15 +129,19 @@ def get_datasets_data(base_dataset, target_dataset_data):
     """required to pass data in a given format to the pre compute
     function
 
+    (works for bxd only probeset datasets)
+
+    # fix issue with fetching of the datasets
+
     output:two dicts for datasets with key==trait and value==strains
     """
+    samples_fetched = base_dataset.group.all_samples_ordered()
     target_traits_data = target_dataset.get_trait_data(
-        base_dataset.group.all_samples_ordered())
+        samples_fetched)
 
     base_traits_data = base_dataset.get_trait_data(
-        base_dataset.group.all_samples_ordered())
+        samples_fetched)
 
-    samples_fetched = base_dataset.group.all_samples_ordered()
 
     target_results = map_shared_keys_to_values(
         samples_fetched, target_traits_data)
-- 
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