From aa671932cd48410269868a80424484c13058a57e Mon Sep 17 00:00:00 2001
From: zsloan
Date: Mon, 28 Nov 2022 22:04:09 +0000
Subject: Fix bugs in show_corr_results.py

---
 wqflask/wqflask/correlation/show_corr_results.py | 9 +++++----
 1 file changed, 5 insertions(+), 4 deletions(-)

(limited to 'wqflask')

diff --git a/wqflask/wqflask/correlation/show_corr_results.py b/wqflask/wqflask/correlation/show_corr_results.py
index c24043cc..63be1d3f 100644
--- a/wqflask/wqflask/correlation/show_corr_results.py
+++ b/wqflask/wqflask/correlation/show_corr_results.py
@@ -79,8 +79,7 @@ def apply_filters(trait, target_trait, target_dataset, **filters):
     def __location_filter__(location_type, location_chr,
                             min_location_mb, max_location_mb):
 
-        if target_dataset["type"] in ["ProbeSet", "'Geno"] and location_type == "gene":
-
+        if target_dataset["type"] in ["ProbeSet", "Geno"] and location_type == "gene":
             return (
                 ((location_chr!=None) and (target_trait["chr"]!=location_chr))
                      or
@@ -233,7 +232,7 @@ def populate_table(dataset_metadata, target_dataset, this_dataset, corr_results,
                 results_dict['pubmed_text'] = target_trait["pubmed_text"]
 
                 if target_trait["abbreviation"]:
-                    results_dict = target_trait['abbreviation']
+                    results_dict['abbreviation'] = target_trait['abbreviation']
 
                 if target_trait["description"] == target_trait['description']:
                     results_dict['description'] = target_trait['description']
@@ -241,6 +240,8 @@ def populate_table(dataset_metadata, target_dataset, this_dataset, corr_results,
                 if target_trait["mean"]:
                     results_dict['mean'] = f"{float(target_trait['mean']):.3f}"
 
+                results_dict['lrs_location'] = target_trait['lrs_location']
+
                 if target_trait["authors"]:
                     authors_list = target_trait['authors'].split(',')
                     results_dict['authors_display'] = ", ".join(
@@ -254,7 +255,7 @@ def populate_table(dataset_metadata, target_dataset, this_dataset, corr_results,
                 except ValueError:
                     results_dict['lod_score'] = "N/A"
             else:
-                results_dict['lrs_location'] = target_trait['lrs_location']
+                results_dict['location'] = target_trait['location']
 
             return results_dict
 
-- 
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