From 8f25786a98447039362f74b8a37dbeacf5f07156 Mon Sep 17 00:00:00 2001 From: DannyArends Date: Thu, 8 Oct 2015 11:38:29 +0200 Subject: Minor, adding a better check for NA --- wqflask/wqflask/wgcna/wgcna_analysis.py | 3 ++- 1 file changed, 2 insertions(+), 1 deletion(-) (limited to 'wqflask') diff --git a/wqflask/wqflask/wgcna/wgcna_analysis.py b/wqflask/wqflask/wgcna/wgcna_analysis.py index 1174ce47..ba806b6d 100644 --- a/wqflask/wqflask/wgcna/wgcna_analysis.py +++ b/wqflask/wqflask/wgcna/wgcna_analysis.py @@ -106,7 +106,8 @@ class WGCNA(object): print "PowerEstimate: {}".format(self.sft[0]) self.results['PowerEstimate'] = self.sft[0] - if r_is_NA(self.sft[0]): + if self.sft[0][0] == "NA": + print "No power is suitable for the analysis, just use 1" self.results['Power'] = 1 # No power could be estimated else: self.results['Power'] = self.sft[0][0] # Use the estimated power -- cgit v1.2.3