From 61b0f112e75c22ff34aebcfa3f9361f575133b60 Mon Sep 17 00:00:00 2001
From: zsloan
Date: Tue, 8 Dec 2020 13:19:50 -0600
Subject: Show the total number of markers in the mapping results table instead
 of just the trimmed number

---
 wqflask/wqflask/marker_regression/run_mapping.py | 8 ++++++--
 wqflask/wqflask/templates/mapping_results.html   | 5 ++++-
 2 files changed, 10 insertions(+), 3 deletions(-)

(limited to 'wqflask')

diff --git a/wqflask/wqflask/marker_regression/run_mapping.py b/wqflask/wqflask/marker_regression/run_mapping.py
index c474e0e0..891fcc66 100644
--- a/wqflask/wqflask/marker_regression/run_mapping.py
+++ b/wqflask/wqflask/marker_regression/run_mapping.py
@@ -426,6 +426,8 @@ class RunMapping(object):
                               marker['display_pos'] = "N/A"
                           self.qtl_results.append(marker)
 
+              total_markers = len(self.qtl_results)
+
               with Bench("Exporting Results"):
                   export_mapping_results(self.dataset, self.this_trait, self.qtl_results, self.mapping_results_path, self.mapping_scale, self.score_type)
 
@@ -489,13 +491,15 @@ class RunMapping(object):
                       perm_results = self.perm_output,
                       significant = significant_for_browser,
                       browser_files = browser_files,
-                      selected_chr = this_chr
+                      selected_chr = this_chr,
+                      total_markers = total_markers
                   )
               else:
                 self.js_data = dict(
                     chr_lengths = chr_lengths,
                     browser_files = browser_files,
-                    selected_chr = this_chr
+                    selected_chr = this_chr,
+                    total_markers = total_markers
                 )
 
     def run_rqtl_plink(self):
diff --git a/wqflask/wqflask/templates/mapping_results.html b/wqflask/wqflask/templates/mapping_results.html
index 9542c29d..1130bcce 100644
--- a/wqflask/wqflask/templates/mapping_results.html
+++ b/wqflask/wqflask/templates/mapping_results.html
@@ -388,8 +388,11 @@
                     "targets": 0,
                     "orderable": false
                 } ],
+                "language": {
+                  "info": "Showing1 from _START_ to _END_ of " + js_data.total_markers + " records",
+                },
                 "order": [[1, "asc" ]],
-                "sDom": "RZtir",
+                "sDom": "iRZtir",
                 "iDisplayLength": -1,
                 "autoWidth": false,
                 "deferRender": true,
-- 
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