From 3c8089e2c3957ca2d4a5906249b4818d367221dc Mon Sep 17 00:00:00 2001
From: Pjotr Prins
Date: Mon, 19 Mar 2018 13:06:13 +0000
Subject: - Disabled PYTHONPATH injection - fix Guix instead, see
 https://github.com/pjotrp/genenetwork2/commit/63a5c8a42ad02e9126bb207465ff5eca98f6515d
 - Renamed WQFLASK_SETTINGS to GN2_SETTINGS

---
 wqflask/utility/tools.py    | 15 +--------------
 wqflask/wqflask/__init__.py |  4 ++--
 2 files changed, 3 insertions(+), 16 deletions(-)

(limited to 'wqflask')

diff --git a/wqflask/utility/tools.py b/wqflask/utility/tools.py
index 8c9fed96..bae3a7f4 100644
--- a/wqflask/utility/tools.py
+++ b/wqflask/utility/tools.py
@@ -54,7 +54,7 @@ def get_setting(command_id,guess=None):
     # print("Looking for "+command_id+"\n")
     command = value(os.environ.get(command_id))
     if command is None or command == "":
-        command = OVERRIDES.get(command_id)
+        command = OVERRIDES.get(command_id) # currently not in use
         if command is None:
             # ---- Check whether setting exists in app
             command = value(app.config.get(command_id))
@@ -285,18 +285,5 @@ assert_dir(JS_TWITTER_POST_FETCHER_PATH)
 
 from six import string_types
 
-if os.environ.get('WQFLASK_OVERRIDES'):
-    jsonfn = get_setting('WQFLASK_OVERRIDES')
-    logger.info("WQFLASK_OVERRIDES: %s" % jsonfn)
-    with open(jsonfn) as data_file:
-        overrides = json.load(data_file)
-        for k in overrides:
-            cmd = overrides[k]
-            if isinstance(cmd, string_types):
-                OVERRIDES[k] = eval(cmd)
-            else:
-                OVERRIDES[k] = cmd
-            logger.debug(OVERRIDES)
-
 # assert_file(PHEWAS_FILES+"/auwerx/PheWAS_pval_EMMA_norm.RData")
 assert_file(JS_TWITTER_POST_FETCHER_PATH+"/js/twitterFetcher_min.js")
diff --git a/wqflask/wqflask/__init__.py b/wqflask/wqflask/__init__.py
index 2188ce17..bc8e9900 100644
--- a/wqflask/wqflask/__init__.py
+++ b/wqflask/wqflask/__init__.py
@@ -13,8 +13,8 @@ logging.basicConfig(level=logging.INFO)
 app = Flask(__name__)
 
 app.config.from_object('cfg.default_settings')   # Get the defaults from cfg.default_settings
-app.config.from_envvar('WQFLASK_SETTINGS')       # See http://flask.pocoo.org/docs/config/#configuring-from-files
-# Note we also use WQFLASK_OVERRIDES
+app.config.from_envvar('GN2_SETTINGS')       # See http://flask.pocoo.org/docs/config/#configuring-from-files
+# Note no longer use the badly named WQFLASK_OVERRIDES (nyi)
 
 app.jinja_env.globals.update(
     undefined = jinja2.StrictUndefined,
-- 
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