From 1921cc3186f493d72a5d14a7e55abdd00914a32f Mon Sep 17 00:00:00 2001
From: zsloan
Date: Tue, 12 Oct 2021 18:49:38 +0000
Subject: Fix R/qtl mapping test

---
 wqflask/tests/unit/wqflask/marker_regression/test_rqtl_mapping.py | 2 +-
 1 file changed, 1 insertion(+), 1 deletion(-)

(limited to 'wqflask')

diff --git a/wqflask/tests/unit/wqflask/marker_regression/test_rqtl_mapping.py b/wqflask/tests/unit/wqflask/marker_regression/test_rqtl_mapping.py
index 9d13e943..b4423d8f 100644
--- a/wqflask/tests/unit/wqflask/marker_regression/test_rqtl_mapping.py
+++ b/wqflask/tests/unit/wqflask/marker_regression/test_rqtl_mapping.py
@@ -32,7 +32,7 @@ class TestRqtlMapping(unittest.TestCase):
                                                     "results" : []}
 
         results = run_rqtl(trait_name="the_trait", vals=[], samples=[],
-        dataset=dataset, mapping_scale="cM", model="normal", method="hk",
+        dataset=dataset, pair_scan=False, mapping_scale="cM", model="normal", method="hk",
         num_perm=5, perm_strata_list=[], do_control="false", control_marker="",
         manhattan_plot=True, cofactors="")
 
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