From 1161cec692aa0e115435e9bd7b6b5fd03fb0efc3 Mon Sep 17 00:00:00 2001
From: Munyoki Kilyungi
Date: Wed, 31 May 2023 19:53:41 +0300
Subject: Delete trait metadata from the show_traits page

* wqflask/wqflask/templates/show_metadata_details.html: Delete.
* wqflask/wqflask/templates/show_trait.html: Delete if block that
checks includes trait metadata.
* wqflask/wqflask/views.py: Remove "metadata".

Signed-off-by: Munyoki Kilyungi <me@bonfacemunyoki.com>
---
 .../wqflask/templates/show_metadata_details.html   | 186 ---------------------
 wqflask/wqflask/templates/show_trait.html          |  12 --
 wqflask/wqflask/views.py                           |  12 --
 3 files changed, 210 deletions(-)
 delete mode 100644 wqflask/wqflask/templates/show_metadata_details.html

(limited to 'wqflask')

diff --git a/wqflask/wqflask/templates/show_metadata_details.html b/wqflask/wqflask/templates/show_metadata_details.html
deleted file mode 100644
index ffb197e2..00000000
--- a/wqflask/wqflask/templates/show_metadata_details.html
+++ /dev/null
@@ -1,186 +0,0 @@
-<table class="table metadata">
-    {% if metadata.accession_id %}
-    <tr>
-        <td><b>Title:</b></td>
-        <td><div>{{ metadata.accession_id }} {% if metadata.title %}: {{ metadata.title }} {% endif %}</div></td>
-    </tr>
-    {% endif %}
-
-    {% if metadata.geo_series %}
-    <tr>
-        <td><b>Geo Series:</b></td>
-        <td><div>{{ metadata.geo_series|safe }}</div></td>
-    </tr>
-    {% endif %}
-
-    {% if metadata.dataset_group %}
-    <tr>
-        <td><b>Dataset Group:</b></td>
-        <td><div>{{ metadata.dataset_group }}</div></td>
-    </tr>
-    {% endif %}
-
-    {% if metadata.species_name %}
-    <tr>
-        <td><b>Species:</b></td>
-        <td><div>{{ metadata.species_name }}</div></td>
-    </tr>
-    {% endif %}
-
-    {% if metadata.inbred_set_name %}
-    <tr>
-        <td><b>Group:</b></td>
-        <td><div>{{ metadata.inbred_set_name }}</div></td>
-    </tr>
-    {% endif %}
-
-    {% if metadata.investigators %}
-    <tr>
-        <td><b>Investigator(s):</b></td>
-        <td><div>{{ metadata.investigators.name }}, {{ metadata.investigators.city }}, {{ metadata.investigators.country }} </div></td>
-    </tr>
-    {% endif %}
-
-    {% if metadata.tissue_name %}
-    <tr>
-	<td><b>Tissue:</b></td>
-	<td>
-	    {% if metadata.about_tissue %}
-	    <div></div>
-	    <details>
-		<summary><b title="Click to view tissue information">{{ metadata.tissue_name }}</b></summary>
-		<b>About the tissue used to generate this set of data:</b>
-		<div>{{ metadata.about_tissue|safe }}</div>
-	    </details>
-	    {% else %}
-	    {{ metadata.tissue_name }}
-	    {% endif %}
-	</td>
-    </tr>
-    {% endif %}
-
-    {% if metadata.platform_name %}
-    <tr>
-	<td><b>Platforms:</b></td>
-	<td>
-	    {% if metadata.about_platform %}
-	    <details>
-		<summary><b title="Click to view platform information">{{ metadata.platform_name }}</b></summary>
-		<b>About the array platform:</b>
-		{{ metadata.about_platform|safe }}
-	    </details>
-	    {% else %}
-	    {{ metadata.platform_name }}
-	    {% endif %}
-	</td>
-    </tr>
-    {% endif %}
-
-    {% if metadata.normalization_name %}
-    <tr>
-	<td><b>Normalization:</b></td>
-	<td>
-	    {{ metadata.normalization_name }}
-	</td>
-    </tr>
-    {% endif %}
-
-    {% if metadata.summary %}
-    <tr>
-        <td></td>
-        <td>
-            <details>
-                <summary><b title="Click to view summary">Summary</b></summary>
-                {{ metadata.summary|safe  }}
-            </details>
-        </td>
-    </tr>
-    {% endif %}
-
-
-    {% if metadata.about_cases %}
-    <tr>
-	<td></td>
-	<td>
-	    <details>
-		<summary><b title="Click to view case information">About the cases used to generate this set of data</b></summary>
-		{{ metadata.about_cases|safe }}
-	    </details>
-	</td>
-    </tr>
-    {% endif %}
-
-    {% if metadata.about_data_processing %}
-    <tr>
-        <td></td>
-	<td>
-	    <details>
-		<summary><b title="Click to view data values and processing">About Data Values and Data Processing</b></summary>
-		{{ metadata.about_data_processing|safe }}
-	    </details>
-	</td>
-    </tr>
-    {% endif %}
-
-    {% if metadata.notes %}
-    <tr>
-        <td></td>
-	<td>
-	    <details>
-		<summary><b>Notes</b></summary>
-		{{ metadata.notes|safe }}
-	    </details>
-	</td>
-    </tr>
-    {% endif %}
-
-    {% if metadata.experiment_design %}
-    <tr>
-        <td></td>
-	<td>
-	    <details>
-		<summary><b>Experiment Type</b></summary>
-		{{ metadata.experiment_design|safe }}
-	    </details>
-	</td>
-    </tr>
-    {% endif %}
-
-    {% if metadata.contributors %}
-    <tr>
-        <td></td>
-	<td>
-	    <details>
-		<summary><b>Contributor(s)</b></summary>
-		{{ metadata.contributors|safe }}
-	    </details>
-	</td>
-    </tr>
-    {% endif %}
-
-    {% if metadata.citation  %}
-    <tr>
-        <td>
-            <td>
-		<details>
-		    <summary><b>Citation</b></summary>
-		    {{ metadata.citation|safe }}
-		</details>
-	    </td>
-    </tr>
-    {% endif %}
-
-    {% if metadata.acknowledgment  %}
-    <tr>
-        <td></td>
-        <td>
-	    <details>
-	    <summary><b>Data source acknowledgment</b></summary>
-	    {{ metadata.acknowledgment|safe }}
-	    </details>
-	</td>
-    </tr>
-    {% endif %}
-
-
-</table>
diff --git a/wqflask/wqflask/templates/show_trait.html b/wqflask/wqflask/templates/show_trait.html
index c394af30..97b613e3 100644
--- a/wqflask/wqflask/templates/show_trait.html
+++ b/wqflask/wqflask/templates/show_trait.html
@@ -57,18 +57,6 @@
                   {% include 'show_trait_details.html' %}
                 </div>
 	      </div>
-	      {% if metadata %}
-		<div class="panel-heading" data-toggle="collapse" data-parent="#accordion" data-target="#collapseMeta">
-                  <h3 class="panel-title">
-                    <span class="glyphicon glyphicon-chevron-down"></span> Data Set Group: {{  dataset.fullname }}
-                  </h3>
-		</div>
-		<div id="collapseMeta" class="panel-collapse collapse in">
-                  <div class="panel-body">
-		    {% include 'show_metadata_details.html' %}
-                  </div>
-		</div>
-	      {% endif %}
             </div>
             <div class="panel panel-default">
               <div class="panel-heading stats_panel" data-toggle="collapse" data-parent="#accordion" data-target="#collapseTwo">
diff --git a/wqflask/wqflask/views.py b/wqflask/wqflask/views.py
index 188dc27b..243c79b2 100644
--- a/wqflask/wqflask/views.py
+++ b/wqflask/wqflask/views.py
@@ -509,20 +509,8 @@ def show_trait_page():
             template_vars.js_data = json.dumps(template_vars.js_data,
                                                default=json_default_handler,
                                                indent="   ")
-            # Should there be any mis-configurations, things will still
-            # work.
-            metadata = {}
-            try:
-                metadata = requests.get(
-                    urljoin(
-                        GN3_LOCAL_URL,
-                        f"/api/metadata/dataset/{request.args.get('dataset')}")
-                ).json()
-            except:
-                metadata = {}
             return render_template(
                 "show_trait.html",
-                metadata=metadata,
                 **{
                     **template_vars.__dict__,
                     "user": privileges_data["user"],
-- 
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