From e63c4014e7bc34b440707be19af3779b72102fdb Mon Sep 17 00:00:00 2001
From: zsloan
Date: Thu, 26 Jan 2017 16:26:16 +0000
Subject: GEMMA now works with CFW data (had to update where it looks for the
 input files and how it writes the phenotype file)

Y-axis for GEMMA now says -log(p)

Updated the style of the trait sample data table in the trait page

Updated dataset_select_menu_orig.js to also build just the Species and Group drop-downs for the trait input page (as opposed to all 4 drop-downs)

Updated dataset menu json file

Added option to show and hide columns to regular search page using colVis

Changed regular and global search result table styles/column widths

Began work on user trait submission code (not working yet though)

Began work on static loading page for mapping results
---
 wqflask/utility/tools.py | 1 +
 1 file changed, 1 insertion(+)

(limited to 'wqflask/utility')

diff --git a/wqflask/utility/tools.py b/wqflask/utility/tools.py
index df032e48..8db9ac6e 100644
--- a/wqflask/utility/tools.py
+++ b/wqflask/utility/tools.py
@@ -215,6 +215,7 @@ GENENETWORK_FILES  = get_setting('GENENETWORK_FILES')
 
 PYLMM_COMMAND      = pylmm_command()
 GEMMA_COMMAND      = gemma_command()
+GEMMA_RESULTS_PATH = get_setting('GEMMA_RESULTS_PATH')
 PLINK_COMMAND      = plink_command()
 TEMPDIR            = tempdir() # defaults to UNIX TMPDIR
 
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