From e3b7d9a24fb38397d4c393503463973d677925fb Mon Sep 17 00:00:00 2001
From: Munyoki Kilyungi
Date: Wed, 7 Sep 2022 11:51:38 +0300
Subject: Move test case to mrna_assay_tissue_data test module

* wqflask/tests/unit/base/test_mrna_assay_tissue_data.py
* wqflask/tests/unit/wqflask/correlation/test_correlation_functions.py
(TestCorrelationFunctions.test_tissue_corr_computation): Delete.
(TestCorrelationFunctions): Move this ...
(test_mrna_assay_tissue_data_initialisation): ... here
---
 .../tests/unit/base/test_mrna_assay_tissue_data.py | 22 ++++++++++++++++++++++
 .../correlation/test_correlation_functions.py      | 14 --------------
 2 files changed, 22 insertions(+), 14 deletions(-)

(limited to 'wqflask/tests')

diff --git a/wqflask/tests/unit/base/test_mrna_assay_tissue_data.py b/wqflask/tests/unit/base/test_mrna_assay_tissue_data.py
index 7a21124a..ecaa9def 100644
--- a/wqflask/tests/unit/base/test_mrna_assay_tissue_data.py
+++ b/wqflask/tests/unit/base/test_mrna_assay_tissue_data.py
@@ -49,3 +49,25 @@ def test_mrna_assay_tissue_data_initialisation(mocker, gene_symbols,
         cursor.fetchall.return_value = sql_fetch_all_results
         MrnaAssayTissueData(conn=mock_conn, gene_symbols=gene_symbols)
         cursor.execute.assert_called_with(*expected_query)
+
+
+def test_get_trait_symbol_and_tissue_values(mocker):
+    """Test for getting trait symbol and tissue_values"""
+    mock_conn = mocker.MagicMock()
+    with mock_conn.cursor() as cursor:
+        cursor.fetchall.side_effect = [
+            (("k1", "203",
+              "112", "xy", "20.11",
+              "Sample Description",
+              "Sample Probe Target Description"),),
+            (("k1", "v1"),
+             ("k2", "v2"),
+             ("k3", "v3")),
+        ]
+        _m = MrnaAssayTissueData(conn=mock_conn,
+                                 gene_symbols=["k1", "k2", "k3"])
+        assert _m.get_symbol_values_pairs() == {
+            "k1": ["v1"],
+            "k2": ["v2"],
+            "k3": ["v3"],
+        }
diff --git a/wqflask/tests/unit/wqflask/correlation/test_correlation_functions.py b/wqflask/tests/unit/wqflask/correlation/test_correlation_functions.py
index 4060d0e5..bb07d41e 100644
--- a/wqflask/tests/unit/wqflask/correlation/test_correlation_functions.py
+++ b/wqflask/tests/unit/wqflask/correlation/test_correlation_functions.py
@@ -19,17 +19,3 @@ def test_tissue_corr_computation(mocker):
         primary_values=primary_values, target_values=target_values,
         corr_method="pearson")
     assert len(results) == 3
-
-
-    @mock.patch("wqflask.correlation.correlation_functions.MrnaAssayTissueData")
-    def test_get_trait_symbol_and_tissue_values(self, mock_class):
-        """test for getting trait symbol and tissue_values"""
-        mock_class_instance = mock_class.return_value
-        mock_class_instance.gene_symbols = ["k1", "k2", "k3"]
-        mock_class_instance.get_symbol_values_pairs.return_value = {
-            "k1": ["v1", "v2", "v3"], "k2": ["v2", "v3"], "k3": ["k3"]}
-        results = get_trait_symbol_and_tissue_values(
-            symbol_list=["k1", "k2", "k3"])
-        mock_class.assert_called_with(gene_symbols=['k1', 'k2', 'k3'])
-        self.assertEqual({"k1": ["v1", "v2", "v3"], "k2": [
-                         "v2", "v3"], "k3": ["k3"]}, results)
-- 
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