From 114e7d3395f28ddead0ff3a94c10d0bf534fb493 Mon Sep 17 00:00:00 2001
From: BonfaceKilz
Date: Fri, 30 Apr 2021 13:05:21 +0300
Subject: autopep8: Fix E101, E11

---
 .../marker_regression/test_qtlreaper_mapping.py    | 26 ++++-----
 .../wqflask/marker_regression/test_rqtl_mapping.py | 64 +++++++++++-----------
 2 files changed, 45 insertions(+), 45 deletions(-)

(limited to 'wqflask/tests/unit')

diff --git a/wqflask/tests/unit/wqflask/marker_regression/test_qtlreaper_mapping.py b/wqflask/tests/unit/wqflask/marker_regression/test_qtlreaper_mapping.py
index 1198740d..47377873 100644
--- a/wqflask/tests/unit/wqflask/marker_regression/test_qtlreaper_mapping.py
+++ b/wqflask/tests/unit/wqflask/marker_regression/test_qtlreaper_mapping.py
@@ -7,17 +7,17 @@ from wqflask.marker_regression.qtlreaper_mapping import gen_pheno_txt_file
 
 
 class TestQtlReaperMapping(unittest.TestCase):
-	@mock.patch("wqflask.marker_regression.qtlreaper_mapping.TEMPDIR", "/home/user/data")
-	def test_gen_pheno_txt_file(self):
-		vals = ["V1", "x", "V4", "V3","x"]
-		samples = ["S1", "S2", "S3", "S4","S5"]
-		trait_filename = "trait_file"
-		with mock.patch("builtins.open", mock.mock_open())as mock_open:
-			gen_pheno_txt_file(samples=samples, vals=vals,
-			                   trait_filename=trait_filename)
-			mock_open.assert_called_once_with("/home/user/data/gn2/trait_file.txt", "w")
-			filehandler = mock_open()
-			write_calls = [mock.call('Trait\t'), mock.call(
-				'S1\tS3\tS4\n'), mock.call('T1\t'), mock.call('V1\tV4\tV3')]
+    @mock.patch("wqflask.marker_regression.qtlreaper_mapping.TEMPDIR", "/home/user/data")
+    def test_gen_pheno_txt_file(self):
+        vals = ["V1", "x", "V4", "V3","x"]
+        samples = ["S1", "S2", "S3", "S4","S5"]
+        trait_filename = "trait_file"
+        with mock.patch("builtins.open", mock.mock_open())as mock_open:
+            gen_pheno_txt_file(samples=samples, vals=vals,
+                               trait_filename=trait_filename)
+            mock_open.assert_called_once_with("/home/user/data/gn2/trait_file.txt", "w")
+            filehandler = mock_open()
+            write_calls = [mock.call('Trait\t'), mock.call(
+                    'S1\tS3\tS4\n'), mock.call('T1\t'), mock.call('V1\tV4\tV3')]
 
-			filehandler.write.assert_has_calls(write_calls)
+            filehandler.write.assert_has_calls(write_calls)
diff --git a/wqflask/tests/unit/wqflask/marker_regression/test_rqtl_mapping.py b/wqflask/tests/unit/wqflask/marker_regression/test_rqtl_mapping.py
index d69a20d3..e518ec22 100644
--- a/wqflask/tests/unit/wqflask/marker_regression/test_rqtl_mapping.py
+++ b/wqflask/tests/unit/wqflask/marker_regression/test_rqtl_mapping.py
@@ -8,35 +8,35 @@ from wqflask.marker_regression.rqtl_mapping import sanitize_rqtl_names
 
 class TestRqtlMapping(unittest.TestCase):
 
-	def setUp(self):
-		self.app_context = app.app_context()
-		self.app_context.push()
-
-	def tearDown(self):
-		self.app_context.pop()
-
-	@mock.patch("wqflask.marker_regression.rqtl_mapping.g")
-	@mock.patch("wqflask.marker_regression.rqtl_mapping.logger")
-	def test_get_trait_data(self, mock_logger, mock_db):
-		"""test for getting trait data_type return True"""
-		query_value = """SELECT value FROM TraitMetadata WHERE type='trait_data_type'"""
-		mock_db.db.execute.return_value.fetchone.return_value = [
-			"""{"type":"trait_data_type","name":"T1","traid_id":"fer434f"}"""]
-		results = get_trait_data_type("traid_id")
-		mock_db.db.execute.assert_called_with(query_value)
-		self.assertEqual(results, "fer434f")
-
-	def test_sanitize_rqtl_phenotype(self):
-		"""test for sanitizing rqtl phenotype"""
-		vals = ['f', "x", "r", "x","x"]
-		results = sanitize_rqtl_phenotype(vals)
-		expected_phenotype_string = 'c(f,NA,r,NA,NA)'
-
-		self.assertEqual(results, expected_phenotype_string)
-
-	def test_sanitize_rqtl_names(self):
-		"""test for sanitzing rqtl names"""
-		vals = ['f', "x", "r", "x","x"]
-		expected_sanitized_name = "c('f',NA,'r',NA,NA)"
-		results = sanitize_rqtl_names(vals)
-		self.assertEqual(expected_sanitized_name, results)
+    def setUp(self):
+        self.app_context = app.app_context()
+        self.app_context.push()
+
+    def tearDown(self):
+        self.app_context.pop()
+
+    @mock.patch("wqflask.marker_regression.rqtl_mapping.g")
+    @mock.patch("wqflask.marker_regression.rqtl_mapping.logger")
+    def test_get_trait_data(self, mock_logger, mock_db):
+        """test for getting trait data_type return True"""
+        query_value = """SELECT value FROM TraitMetadata WHERE type='trait_data_type'"""
+        mock_db.db.execute.return_value.fetchone.return_value = [
+                """{"type":"trait_data_type","name":"T1","traid_id":"fer434f"}"""]
+        results = get_trait_data_type("traid_id")
+        mock_db.db.execute.assert_called_with(query_value)
+        self.assertEqual(results, "fer434f")
+
+    def test_sanitize_rqtl_phenotype(self):
+        """test for sanitizing rqtl phenotype"""
+        vals = ['f', "x", "r", "x","x"]
+        results = sanitize_rqtl_phenotype(vals)
+        expected_phenotype_string = 'c(f,NA,r,NA,NA)'
+
+        self.assertEqual(results, expected_phenotype_string)
+
+    def test_sanitize_rqtl_names(self):
+        """test for sanitzing rqtl names"""
+        vals = ['f', "x", "r", "x","x"]
+        expected_sanitized_name = "c('f',NA,'r',NA,NA)"
+        results = sanitize_rqtl_names(vals)
+        self.assertEqual(expected_sanitized_name, results)
-- 
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