From ee1e49b90663be72032c8dee32748e97bc28e1e9 Mon Sep 17 00:00:00 2001
From: zsloan
Date: Fri, 21 Dec 2018 10:48:33 -0600
Subject: Fixed collections so they can be very large (1000+ traits)

Added option to submit traits in collection to BNW

Fixed issue with "x" values for user-submitted traits

Fixed issue where post-publications descriptions were wrongly appearing in global search results
---
 wqflask/maintenance/convert_geno_to_bimbam.py | 4 ++--
 1 file changed, 2 insertions(+), 2 deletions(-)

(limited to 'wqflask/maintenance')

diff --git a/wqflask/maintenance/convert_geno_to_bimbam.py b/wqflask/maintenance/convert_geno_to_bimbam.py
index 8f331a06..528b98cf 100644
--- a/wqflask/maintenance/convert_geno_to_bimbam.py
+++ b/wqflask/maintenance/convert_geno_to_bimbam.py
@@ -180,8 +180,8 @@ class ConvertGenoFile(object):
                 break
 
 if __name__=="__main__":
-    Old_Geno_Directory = """/home/zas1024/genotype_files/genotype/"""
-    New_Geno_Directory = """/home/zas1024/genotype_files/genotype/bimbam/"""
+    Old_Geno_Directory = """/export/local/home/zas1024/gn2-zach/genotype_files/genotype"""
+    New_Geno_Directory = """/export/local/home/zas1024/gn2-zach/genotype_files/genotype/bimbam"""
     #Input_File = """/home/zas1024/gene/genotype_files/genotypes/BXD.geno"""
     #Output_File = """/home/zas1024/gene/wqflask/wqflask/pylmm/data/bxd.snps"""
     #convertob = ConvertGenoFile("/home/zas1024/gene/genotype_files/genotypes/SRxSHRSPF2.geno", "/home/zas1024/gene/genotype_files/new_genotypes/SRxSHRSPF2.json")
-- 
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