From b462fae9df948dbf35232a764d61fbf10c930e82 Mon Sep 17 00:00:00 2001 From: Lei Yan Date: Mon, 3 Feb 2014 12:28:08 -0600 Subject: On branch master --- wqflask/maintenance/dataset/probesets.py | 45 ++++++++++++++++++++++++++++++++ 1 file changed, 45 insertions(+) create mode 100644 wqflask/maintenance/dataset/probesets.py (limited to 'wqflask/maintenance/dataset/probesets.py') diff --git a/wqflask/maintenance/dataset/probesets.py b/wqflask/maintenance/dataset/probesets.py new file mode 100644 index 00000000..7fa65786 --- /dev/null +++ b/wqflask/maintenance/dataset/probesets.py @@ -0,0 +1,45 @@ +import sys +sys.path.append('.') +sys.path.append('..') + +from utilities import db + +def fetch_probesetxref(probesetfreezeid): + cursor = db.get_cursor() + sql = """ + SELECT ProbeSetXRef.`ProbeSetId`, ProbeSetXRef.`DataId` + FROM ProbeSetXRef + WHERE ProbeSetXRef.`ProbeSetFreezeId`=%s + """ + cursor.execute(sql, (probesetfreezeid)) + return cursor.fetchall() + +def fetch_probeset(probesetid): + cursor = db.get_cursor() + sql = """ + SELECT * + FROM ProbeSet + WHERE ProbeSet.`Id`=%s + """ + cursor.execute(sql, (probesetid)) + return cursor.fetchone() + +def fetch_probesetdata(probesetdataid): + cursor = db.get_cursor() + sql = """ + SELECT Strain.`Id`, Strain.`Name`, ProbeSetData.`value` + FROM ProbeSetData, Strain + WHERE ProbeSetData.`Id`=%s + AND ProbeSetData.`StrainId`=Strain.`Id`; + """ + cursor.execute(sql, (probesetdataid)) + return cursor.fetchall() + +results = fetch_probesetxref(112) +for row in results: + print row + probesetid = row[0] + probesetdataid = row[1] + print fetch_probeset(probesetid) + print fetch_probesetdata(probesetdataid) + break \ No newline at end of file -- cgit v1.2.3