From e334da7dd55dd102c471a144ef0a63389830a256 Mon Sep 17 00:00:00 2001
From: Zachary Sloan
Date: Thu, 14 Feb 2013 17:45:10 -0600
Subject: Have marker regression results displaying as a scatterplot (just the
 points) using d3.js

---
 wqflask/base/data_set.py | 2 ++
 1 file changed, 2 insertions(+)

(limited to 'wqflask/base')

diff --git a/wqflask/base/data_set.py b/wqflask/base/data_set.py
index d4e97370..0b3b5248 100755
--- a/wqflask/base/data_set.py
+++ b/wqflask/base/data_set.py
@@ -77,9 +77,11 @@ class Markers(object):
     def add_pvalues(self, p_values):
         for marker, p_value in itertools.izip(self.markers, p_values):
             marker['p_value'] = p_value
+            marker['lod_score'] = -math.log10(marker['p_value'])
             #Using -log(p) for the LRS; need to ask Rob how he wants to get LRS from p-values
             marker['lrs_value'] = -math.log10(marker['p_value']) * 4.61
 
+
 class DatasetGroup(object):
     """
     Each group has multiple datasets; each species has multiple groups.
-- 
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