From 6b367e3e2ee144aae5b79c50234faf0ea49adba6 Mon Sep 17 00:00:00 2001
From: Zachary Sloan
Date: Thu, 23 Jan 2014 21:52:03 +0000
Subject: Histogram is working

Fixed some bug with generating the manhattan plot for the HLC data set
---
 wqflask/base/data_set.py | 2 ++
 1 file changed, 2 insertions(+)

(limited to 'wqflask/base')

diff --git a/wqflask/base/data_set.py b/wqflask/base/data_set.py
index d421f21e..0d295bed 100755
--- a/wqflask/base/data_set.py
+++ b/wqflask/base/data_set.py
@@ -185,6 +185,7 @@ class HumanMarkers(Markers):
         self.markers = []
         for line in marker_data_fh:
             splat = line.strip().split()
+            print("splat:", splat)
             marker = {}
             marker['chr'] = int(splat[0])
             marker['name'] = splat[1]
@@ -204,6 +205,7 @@ class HumanMarkers(Markers):
         #    #Using -log(p) for the LRS; need to ask Rob how he wants to get LRS from p-values
         #    marker['lrs_value'] = -math.log10(marker['p_value']) * 4.61
         
+        print("p_values2:", p_values)
         super(HumanMarkers, self).add_pvalues(p_values)
         
         with Bench("deleting markers"):
-- 
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