From d8dae52c0b534a37697962326f0fcbac781b0ce1 Mon Sep 17 00:00:00 2001 From: Zachary Sloan Date: Wed, 29 Jan 2014 19:01:45 +0000 Subject: Limited number of markers in marker regression result table to those with a lod score > 2 Did some work towards adding the colored backgrounds to chromosome areas in the manhattan plot Changed the last two chromosomes for human manhattan plots to X and X/Y Started work on writing a script that can independently run the pyLMM code and store the results in redis --- wqflask/base/data_set.py | 1 - 1 file changed, 1 deletion(-) (limited to 'wqflask/base/data_set.py') diff --git a/wqflask/base/data_set.py b/wqflask/base/data_set.py index 0d295bed..9fbccf80 100755 --- a/wqflask/base/data_set.py +++ b/wqflask/base/data_set.py @@ -169,7 +169,6 @@ class Markers(object): for marker, p_value in itertools.izip(self.markers, p_values): marker['p_value'] = p_value if math.isnan(marker['p_value']) or marker['p_value'] <= 0: - print("p_value is:", marker['p_value']) marker['lod_score'] = 0 marker['lrs_value'] = 0 else: -- cgit v1.2.3