From 7d9ead16f45cc68d1543c673487891b03c990efe Mon Sep 17 00:00:00 2001
From: zsloan
Date: Fri, 7 Feb 2020 12:44:15 -0600
Subject: Users can now add and do mapping on genotype files that only include
 a subset of samples/strains

Also filtered the results used by Christian's genome browser, so now it should have an easier time loading when dealing with larger numbers of markers
---
 wqflask/base/data_set.py | 9 +++++++++
 1 file changed, 9 insertions(+)

(limited to 'wqflask/base/data_set.py')

diff --git a/wqflask/base/data_set.py b/wqflask/base/data_set.py
index 49600c64..7fe9a8ac 100644
--- a/wqflask/base/data_set.py
+++ b/wqflask/base/data_set.py
@@ -347,6 +347,15 @@ class DatasetGroup(object):
         if maternal and paternal:
             self.parlist = [maternal, paternal]
 
+    def get_genofiles(self):
+        jsonfile = "%s/%s.json" % (webqtlConfig.GENODIR, self.name)
+        try:
+            f = open(jsonfile)
+        except:
+            return None
+        jsondata = json.load(f)
+        return jsondata['genofile']
+
     def get_samplelist(self):
         result = None
         key = "samplelist:v3:" + self.name
-- 
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