HQF BXD Striatum ILM6.1 (Dec10) RankInv

From d0911a04958a04042da02a334ccc528dae79cc17 Mon Sep 17 00:00:00 2001 From: zsloan Date: Fri, 27 Mar 2015 20:28:51 +0000 Subject: Removed everything from 'web' directory except genofiles and renamed the directory to 'genotype_files' --- web/dbdoc/UTHSC_Str_RankInv_1210.html | 221 ---------------------------------- 1 file changed, 221 deletions(-) delete mode 100755 web/dbdoc/UTHSC_Str_RankInv_1210.html (limited to 'web/dbdoc/UTHSC_Str_RankInv_1210.html') diff --git a/web/dbdoc/UTHSC_Str_RankInv_1210.html b/web/dbdoc/UTHSC_Str_RankInv_1210.html deleted file mode 100755 index 425f8d96..00000000 --- a/web/dbdoc/UTHSC_Str_RankInv_1210.html +++ /dev/null @@ -1,221 +0,0 @@ - -HQF BXD Striatum ILM6.1 (Dec10) RankInv - - - - - - - - - - - - - - - - - - - - - - - - - -

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HQF BXD Striatum ILM6.1 (Dec10) RankInv

- - Accession number: GN298

- NOTE: The data from the HQF BXD Striatum Illumina Mouse-6.1 November 2007 Rank Invariant Data Set were corrected for a batch effect due to the hybridization of different strains on different dates. Data were adjusted for individual samples using ANOVA to remove effect of batch (factor = date) in Partek Batch Remover. The first 3 principal components capture 19% of the variance in the entire data set after this correction. -

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Index	Slide	Position	Strain	Tissue	Age	Sex	Date
1	1736925204	D	C57BL/6J	Striatum	58	F	6.7.07
2	1736925140	D	C57BL/6J	Striatum	61	M	6.12.07
3	1736925204	E	DBA/2J	Striatum	58	F	6.7.07
4	1736925140	E	DBA/2J	Striatum	60	M	6.12.07
5	1736925140	A	B6D2F1/J	Striatum	59	F	6.12.07
6	1736925204	A	B6D2F1/J	Striatum	59	M	6.7.07
7	1736925225	A	BXD1	Striatum	59	F	6.21.07
8	1716756015	A	BXD1	Striatum	59	M	6.22.07
9	1736925169	A	BXD2	Striatum	61	F	6.21.07
10	1716756027	A	BXD2	Striatum	61	M	6.22.07
11	1716756004	C	BXD5	Striatum	58	F	6.22.07
12	1716756036	C	BXD5	Striatum	58	M	6.28.07
13	1716756004	D	BXD6	Striatum	59	F	6.22.07
14	1716756036	D	BXD6	Striatum	59	M	6.28.07
15	1716756004	E	BXD8	Striatum	61	F	6.22.07
16	1716756036	E	BXD8	Striatum	61	M	6.28.07
17	1716756004	F	BXD9	Striatum	60	F	6.22.07
18	1716756036	F	BXD9	Striatum	60	M	6.28.07
19	1736925139	C	BXD11	Striatum	59	F	6.12.07
20	1716756045	B	BXD11	Striatum	59	M	6.28.07
21	1736925225	B	BXD12	Striatum	62	F	6.21.07
22	1716756015	B	BXD12	Striatum	59	M	6.22.07
23	1736925225	C	BXD13	Striatum	60	F	6.21.07
24	1716756015	C	BXD13	Striatum	60	M	6.22.07
25	1716756045	C	BXD14	Striatum	59	F	6.28.07
26	1736925351	C	BXD14	Striatum	60	M	6.15.07
27	1736925225	D	BXD15	Striatum	60	F	6.21.07
28	1716756015	D	BXD15	Striatum	60	M	6.22.07
29	1736925140	B	BXD16	Striatum	58	F	6.12.07
30	1736925204	B	BXD16	Striatum	60	M	6.7.07
31	1736925225	E	BXD18	Striatum	59	F	6.21.07
32	1716756015	E	BXD18	Striatum	59	M	6.22.07
33	1736925225	F	BXD19	Striatum	60	F	6.21.07
34	1716756015	F	BXD19	Striatum	60	M	6.22.07
35	1716756045	D	BXD20	Striatum	60	F	6.28.07
36	1736925139	D	BXD20	Striatum	60	M	6.12.07
37	1736925169	B	BXD21	Striatum	48	F	6.21.07
38	1716756027	B	BXD21	Striatum	48	M	6.22.07
39	1736925351	D	BXD22	Striatum	60	F	6.15.07
40	1716756045	E	BXD22	Striatum	60	M	6.28.07
41	1736925169	C	BXD23	Striatum	60	F	6.21.07
42	1716756027	C	BXD23	Striatum	60	M	6.22.07
43	1736925140	C	BXD24b	Striatum	58	F	6.12.07
44	1736925204	C	BXD24b	Striatum	58	M	6.7.07
45	1736925169	D	BXD27	Striatum	60	F	6.21.07
46	1716756027	D	BXD27	Striatum	60	M	6.22.07
47	1736925169	E	BXD28	Striatum	60	F	6.21.07
48	1716756027	E	BXD28	Striatum	60	M	6.22.07
49	1736925169	F	BXD29	Striatum	58	F	6.21.07
50	1716756027	F	BXD29	Striatum	58	M	6.22.07
51	1736925171	A	BxD31	Striatum	60	F	6.21.07
52	1716756034	A	BxD31	Striatum	60	M	6.28.07
53	1736925171	B	BXD32	Striatum	57	F	6.21.07
54	1716756034	B	BXD32	Striatum	57	M	6.28.07
55	1736925171	C	BXD33	Striatum	59	F	6.21.07
56	1716756034	C	BXD33	Striatum	59	M	6.28.07
57	1736925171	D	BXD34	Striatum	60	F	6.21.07
58	1716756034	D	BXD34	Striatum	60	M	6.28.07
59	1736925171	E	BXD36	Striatum	57	F	6.21.07
60	1716756034	E	BXD36	Striatum	57	M	6.28.07
61	1736925171	F	BXD38	Striatum	60	F	6.21.07
62	1716756034	F	BXD38	Striatum	60	M	6.28.07
63	1716756004	A	BXD40	Striatum	60	F	6.22.07
64	1716756036	A	BXD40	Striatum	60	M	6.28.07
65	1716756004	B	BXD42	Striatum	58	F	6.22.07
66	1716756036	B	BXD42	Striatum	58	M	6.28.07
67	1736925339	E	BXD43	Striatum	53	F	7.3.07
68	1736925339	F	BXD44	Striatum	56	M	7.3.07
69	1736925300	A	BXD45	Striatum	60	F	7.6.07
70	1825397020	D	BXD45	Striatum	63	M	7.10.07
71	1736925300	B	BXD51	Striatum	66	F	7.6.07
72	1825397020	E	BXD51	Striatum	64	M	7.10.07
73	1825397020	F	BXD55	Striatum	55	F	7.10.07
74	1736925300	C	BXD55	Striatum	55	M	7.6.07
75	1736925300	D	BXD60	Striatum	61	F	7.6.07
76	1825397021	A	BXD60	Striatum	61	M	7.10.07
77	1736925300	E	BXD61	Striatum	62	F	7.6.07
78	1825397021	B	BXD61	Striatum	62	M	7.10.07
79	1736925300	F	BXD62	Striatum	62	F	7.6.07
80	1825397021	C	BXD62	Striatum	63	M	7.10.07
81	1825397021	E	BXD65	Striatum	62	M	7.10.07
82	1736925245	B	BXD66	Striatum	59	M	7.3.07
83	1736925245	C	BXD68	Striatum	56	F	7.3.07
84	1736925245	D	BXD69	Striatum	65	M	7.3.07
85	1736925245	E	BXD70	Striatum	61	M	7.3.07
86	1736925339	A	BXD73	Striatum	62	F	7.3.07
87	1736925292	A	BXD73	Striatum	50	M	7.6.07
88	1736925292	D	BXD77	Striatum	50	F	7.6.07
89	1736925339	B	BXD84	Striatum	55	F	7.3.07
90	1736925292	B	BXD84	Striatum	55	M	7.6.07
91	1736925292	E	BXD85	Striatum	57	M	7.6.07
92	1736925292	F	BXD86	Striatum	58	M	7.6.07
93	1736925299	A	BXD87	Striatum	31	M	7.6.07
94	1736925299	B	BXD89	Striatum	63	M	7.6.07
95	1736925299	C	BXD90	Striatum	66	M	7.6.07
96	1736925292	C	BXD96	Striatum	61	F	7.6.07
97	1736925339	C	BXD96	Striatum	61	M	7.3.07
98	1736925299	D	BXD97	Striatum	61	M	7.6.07
99	1736925339	D	BXD100	Striatum	61	F	7.3.07
100	1736925140	F	129S1/SvImJ	Striatum	60	F	6.12.07
101	1736925204	F	129S1/SvImJ	Striatum	59	M	6.7.07
102	1736925129	A	A/J	Striatum	59	F	6.7.07
103	1736925241	A	A/J	Striatum	59	M	6.12.07
104	1736925129	B	AKR/J	Striatum	59	F	6.7.07
105	1736925241	B	AKR/J	Striatum	59	M	6.12.07
106	1736925241	C	BALB/CByJ	Striatum	59	F	6.12.07
107	1736925129	C	BALB/CByJ	Striatum	59	M	6.7.07
108	1716756045	A	BTBRT+tf/J	Striatum	59	F	6.28.07
109	1736925139	E	BTBRT+tf/J	Striatum	60	M	6.12.07
110	1716756045	F	BXSB/MpJ	Striatum	61	F	6.28.07
111	1736925351	E	BXSB/MpJ	Striatum	61	M	6.15.07
112	1736925129	D	C3H/HeJ	Striatum	60	F	6.7.07
113	1736925241	D	C3H/HeJ	Striatum	60	M	6.12.07
114	1736925129	E	CAST/Ei	Striatum	57	F	6.7.07
115	1736925241	E	CAST/Ei	Striatum	61	M	6.12.07
116	1736925129	F	FVB/NJ	Striatum	60	F	6.7.07
117	1736925241	F	FVB/NJ	Striatum	60	M	6.12.07
118	1716756057	A	KK/HiJ	Striatum	62	F	6.7.07
119	1736925303	A	KK/HiJ	Striatum	62	F	6.15.07
120	1716756057	B	MOLF/EiJ	Striatum	60	F	6.7.07
121	1736925303	B	MOLF/EiJ	Striatum	60	M	6.15.07
122	1716756057	D	NOD/LtJ	Striatum	58	F	6.7.07
123	1736925303	C	NOD/LtJ	Striatum	58	M	6.15.07
124	1736925303	D	NZB/BlnJ	Striatum	61	F	6.15.07
125	1716756057	E	NZB/BlnJ	Striatum	58	M	6.7.07
126	1736925303	E	NZO/HiltJ	Striatum	61	F	6.15.07
127	1716756057	F	NZO/HiltJ	Striatum	61	M	6.7.07
128	1736925139	F	NZW/LacJ	Striatum	65	F	6.12.07
129	1825397021	D	NZW/LacJ	Striatum	70	M	7.10.07
130	1736925303	F	PWD/PhJ	Striatum	70	F	6.15.07
131	1716756057	C	PWD/PhJ	Striatum	70	M	6.7.07
132	1736925139	A	PWK/PhJ	Striatum	59	F	6.12.07
133	1736925351	A	PWK/PhJ	Striatum	60	M	6.15.07
134	1736925351	B	WSB/EiJ`	Striatum	71	F	6.15.07
135	1736925139	B	WSB/EiJ	Striatum	71	M	6.12.07

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