+ Hippocampus mRNA - Hippocampus Illumina RSE (Oct08) RankInv beta
Accession number: GN212
+Waiting for the data provider to submit their info file
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+Summary:
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+Experimental data set: Restraint stress followed by a single ethanol injection (RSE). Survival period X hours.
+Please copy text and style for other INFO pages and see Mike Miles INFO pages.
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+ This data set entered by Arthur Centeno and Lu Lu, Oct 15, 2008. Please contact Dr. Lu Lu regarding these expression data at lulu@utmem.edu.
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+ Replication and Sample Balance: We obtained matched male and female sample from 28 strains. The following three strains are represented by male samples only: LXS25, 88, and 103. Two other strains, LXS43 and 50 are represented only by female samples.
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+Legend:Sex balance of the RSE data set is revealed by expression of the Xist RNA (Illumina probe ILM1042800446). Male samples have low expression of Xist (about 7 units), whereas females have high expression (about 13 units). Each bar provides the mean expression value (log2 transformed) for a single strain. Strains with both male and female samples have intermediate averages and large error bars.
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+About the cases used to generate this set of data:
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+About the tissue used to generate this set of data:
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+Index | TubeID | Group | Strain | Age | Sex | Source |
+1 | R2595E.1 | GDP | 129S1/SvImJ | 59 | F | UTHSC RW |
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+About downloading this data set:
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+About the array platfrom:
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+About data values and data processing:
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+Index | TubeID | Strain | Original CEL | Scale factor | Background Average | Present | Absent | Marginal | AFFX-b-ActinMur (3'/5') | AFFX-GapdhMur (3'/5') | Batch Id | Used for batch control |
+1 | R2595E.1 | 129S1/SvImJ | R2595E.1.CEL | 1.79 | 115 | 61.00% | 37.50% | 1.50% | 1.46 | 0.77 | 1 | Y |
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+Data source acknowledgment:
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+GEO Series Data: This section to be used for GEO submission of the whole series of arrays
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+GSE Series
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