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- UWA Illumina Spleen (Nov08) RSN ** 
Accession number: GN216
-Waiting for the data provider to submit their info file
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-Summary:
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-All data was generated using female mice, 8 to 10 weeks old. RNA was extracted using the QIAGEN RNAeasy Plus kit. RNA was amplified using the Illumina Illumina TotalPrep RNA Amplification Kit. Sample were hybridized to Illumina MouseRef-8 V1.1 beadchips in 2008.
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- Illumina 8.1 array data transformed using the Robust Spline Normalization (RSN) method.
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- Please contact Dr. Grant Morahan (gem@waimr.uwa.edu.au), University of Western Australia, Perth, regarding this new data set.
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- Data entered by Munish Mehta and Arthur Centeno, November 2, 2008.
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-About the cases used to generate this set of data:
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-Please contact Dr. Grant Morahan at the University of Western Australia, Perth, regarding these data. All female young adult mice.
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-About the tissue used to generate this set of data:
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-eQTL Statistics: Maximum LRS for this data set is 174.9 for probe ILM3870301 (Gene Symbol H2-Ea). The total number of probes with LOD > 10 and RS > 46 is 166 . This is an excellent yield for a data set consisting of 26 BXD strains, both parents and the B2D2F1. The latter three are not used in mapping.
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-| Index | TubeID | Group | Strain | Age | Sex | Source |
-| 1 | R2595E.1 | GDP | 129S1/SvImJ | 59 | F | UTHSC RW |
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-About downloading this data set:
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-About the array platfrom:
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-About data values and data processing:
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-| Index | TubeID | Strain | Original CEL | Scale factor | Background Average | Present | Absent | Marginal | AFFX-b-ActinMur (3'/5') | AFFX-GapdhMur (3'/5') | Batch Id | Used for batch control |
-| 1 | R2595E.1 | 129S1/SvImJ | R2595E.1.CEL | 1.79 | 115 | 61.00% | 37.50% | 1.50% | 1.46 | 0.77 | 1 | Y |
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-Data source acknowledgment:
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-Information about this text file:
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-GEO Series Data: This section to be used for GEO submission of the whole series of arrays
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-GSE Series
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