From ea46f42ee640928b92947bfb204c41a482d80937 Mon Sep 17 00:00:00 2001 From: root Date: Tue, 8 May 2012 18:39:56 -0500 Subject: Add all the source codes into the github. --- web/dbdoc/Hipp_M430.RO_0706.html | 77 ++++++++++++++++++++++++++++++++++++++++ 1 file changed, 77 insertions(+) create mode 100755 web/dbdoc/Hipp_M430.RO_0706.html (limited to 'web/dbdoc/Hipp_M430.RO_0706.html') diff --git a/web/dbdoc/Hipp_M430.RO_0706.html b/web/dbdoc/Hipp_M430.RO_0706.html new file mode 100755 index 00000000..74d6d91b --- /dev/null +++ b/web/dbdoc/Hipp_M430.RO_0706.html @@ -0,0 +1,77 @@ + +Hippocampus M430.RO (Oct06) Metadata + + + + + + + + + + + + + + + + + +
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Hippocampus M430 R. Overall Data Set + modify this page

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Experimental transform of Hippocampus Consortium data set using a new Cell Definition File generated by Dr. Fan Meng at University of Michigan (see http://brainarray.mbni.med.umich.edu/Brainarray/Aboutus/Aboutus.asp). Implementation by Rupert Overall (Max-Delbruck-Centrum, Berlin). + +

The ID is the Entrez GeneID. Rupert Overal retransformed the CEL files with the affy.rma package in R using a new CDF file (Mm430_Mm_ENTREZG_8 from the website of Dr. Meng's group in Michigan "http://brainarray.mbni.med.umich.edu/Brainarray/Database/CustomCDF/genomic_curated_CDF.asp"). +This bundles together probes belonging to the same Entrez Gene accession together. The raw output of this transform is, in fact, the GeneID with a trailing "_at" which we have removed to simplify translation into Gene Symbols. + + +

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