Download the entire AKXD genotype file used in GeneNetwork (n = 1352 markers with useful strain distribution pattens from a total of 5448 informative markers). We have modified the orginal Wellcome-CTC genotypes by adding selected microsatellite markers. We have also curate the data and have removed somewhat improbable double-recombinant haplotypes and by imputing genotypes for a few untyped strains using very tightly linked markers. This genotype "smoothing" may remove some genuine recombinations and may result in linkage maps that will be very slightly conservative.
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