From ea46f42ee640928b92947bfb204c41a482d80937 Mon Sep 17 00:00:00 2001 From: root Date: Tue, 8 May 2012 18:39:56 -0500 Subject: Add all the source codes into the github. --- web/bug0.html | 1742 +++++++++++++++++++++++++++++++++++++++++++++++++++++++++ 1 file changed, 1742 insertions(+) create mode 100755 web/bug0.html (limited to 'web/bug0.html') diff --git a/web/bug0.html b/web/bug0.html new file mode 100755 index 00000000..bb57a4aa --- /dev/null +++ b/web/bug0.html @@ -0,0 +1,1742 @@ +

Traceback (most recent call last): + File "./cmdLine.py", line 120, in ? + page = MultipleIntMappingPage(fd) + File "/node_apps/www/cgi-bin/intervalPage.py", line 2733, in __init__ + IntMappingPage.__init__(self,fd) + File "/node_apps/www/cgi-bin/intervalPage.py", line 228, in __init__ + LRSArray = _genotype.permutation(strains = _strains, trait = _vals, nperm=fd.nperm) +IndexError: the length of the strain list and the value list are different, +or they are less than 8 + ++
+ +
Traceback (most recent call last): + File "./cmdLine.py", line 120, in ? + page = MultipleIntMappingPage(fd) + File "/node_apps/www/cgi-bin/intervalPage.py", line 2733, in __init__ + IntMappingPage.__init__(self,fd) + File "/node_apps/www/cgi-bin/intervalPage.py", line 228, in __init__ + LRSArray = _genotype.permutation(strains = _strains, trait = _vals, nperm=fd.nperm) +IndexError: the length of the strain list and the value list are different, +or they are less than 8 + ++
+ +
Traceback (most recent call last): + File "/home/hqli/public_html/cgi-bin/beta/main.py", line 162, in ? + page = SearchResultPage(fd) + File "/home/hqli/public_html/cgi-bin/beta/searchPage.py", line 493, in __init__ + self.cursor.execute(item) + File "/usr/lib/python2.3/site-packages/MySQLdb/cursors.py", line 137, in execute + self.errorhandler(self, exc, value) + File "/usr/lib/python2.3/site-packages/MySQLdb/connections.py", line 33, in defaulterrorhandler + raise errorclass, errorvalue +ProgrammingError: (1064, "You have an error in your SQL syntax; check the manual that corresponds to your MySQL server version for the right syntax to use near ' Table1.Name=Table3.Name , Table2.Name=Table3.Name GROUP BY Table1.Name) as Com' at line 1") + ++
+ +
Traceback (most recent call last): + File "/home/hqli/public_html/cgi-bin/beta/main.py", line 162, in ? + page = SearchResultPage(fd) + File "/home/hqli/public_html/cgi-bin/beta/searchPage.py", line 493, in __init__ + self.cursor.execute(item) + File "/usr/lib/python2.3/site-packages/MySQLdb/cursors.py", line 137, in execute + self.errorhandler(self, exc, value) + File "/usr/lib/python2.3/site-packages/MySQLdb/connections.py", line 33, in defaulterrorhandler + raise errorclass, errorvalue +ProgrammingError: (1064, "You have an error in your SQL syntax; check the manual that corresponds to your MySQL server version for the right syntax to use near ' Table1.Name=Table3.Name , Table2.Name=Table3.Name GROUP BY Table1.Name) as Com' at line 1") + ++
+ +
Traceback (most recent call last): + File "/home/hqli/public_html/cgi-bin/beta/main.py", line 162, in ? + page = SearchResultPage(fd) + File "/home/hqli/public_html/cgi-bin/beta/searchPage.py", line 494, in __init__ + self.cursor.execute(item) + File "/usr/lib/python2.3/site-packages/MySQLdb/cursors.py", line 137, in execute + self.errorhandler(self, exc, value) + File "/usr/lib/python2.3/site-packages/MySQLdb/connections.py", line 33, in defaulterrorhandler + raise errorclass, errorvalue +ProgrammingError: (1064, "You have an error in your SQL syntax; check the manual that corresponds to your MySQL server version for the right syntax to use near ' Table1.Name=Table3.Name , Table2.Name=Table3.Name GROUP BY Table1.Name) as Com' at line 1") + ++
+ +
Traceback (most recent call last): + File "/home/hqli/public_html/cgi-bin/beta/main.py", line 160, in ? + from searchPage import * + File "/home/hqli/public_html/cgi-bin/beta/searchPage.py", line 539 + i += 1 + ^ + SyntaxError: invalid syntax + ++
+ +
Traceback (most recent call last): + File "/home/hqli/public_html/cgi-bin/beta/main.py", line 160, in ? + from searchPage import * + File "/home/hqli/public_html/cgi-bin/beta/searchPage.py", line 577 + i += 1 + ^ + SyntaxError: invalid syntax + ++
+ +
Traceback (most recent call last): + File "/home/hqli/public_html/cgi-bin/beta/main.py", line 160, in ? + from searchPage import * + File "/home/hqli/public_html/cgi-bin/beta/searchPage.py", line 577 + i += 1 + ^ + SyntaxError: invalid syntax + ++
+ +
Traceback (most recent call last):
+ File "/home/hqli/public_html/cgi-bin/beta/main.py", line 160, in ?
+ from searchPage import *
+ File "/home/hqli/public_html/cgi-bin/beta/searchPage.py", line 554
+ SearchText.append(HT.Italic('match the term '), Id='green'))
+ ^
+ SyntaxError: invalid syntax
+
+
++ +
Traceback (most recent call last):
+ File "/home/hqli/public_html/cgi-bin/beta/main.py", line 160, in ?
+ from searchPage import *
+ File "/home/hqli/public_html/cgi-bin/beta/searchPage.py", line 555
+ ttext.append(HT.Italic('match the term '), Id='green'))
+ ^
+ SyntaxError: invalid syntax
+
+
++ +
Traceback (most recent call last): + File "/node_apps/www/webqtl/main.py", line 162, in ? + page = SearchResultPage(fd) + File "/node_apps/www/cgi-bin/searchPage.py", line 86, in __init__ + self.dbPrefix = map(lambda X: X.prefix, self.dbInfos) + File "/node_apps/www/cgi-bin/searchPage.py", line 86, in++ self.dbPrefix = map(lambda X: X.prefix, self.dbInfos) +AttributeError: 'NoneType' object has no attribute 'prefix' + +
+ +
Traceback (most recent call last): + File "/node_apps/www/webqtl/main.py", line 162, in ? + page = SearchResultPage(fd) + File "/node_apps/www/cgi-bin/searchPage.py", line 86, in __init__ + self.dbPrefix = map(lambda X: X.prefix, self.dbInfos) + File "/node_apps/www/cgi-bin/searchPage.py", line 86, in++ self.dbPrefix = map(lambda X: X.prefix, self.dbInfos) +AttributeError: 'NoneType' object has no attribute 'prefix' + +
+ +
Traceback (most recent call last): + File "/node_apps/www/webqtl/main.py", line 162, in ? + page = SearchResultPage(fd) + File "/node_apps/www/cgi-bin/searchPage.py", line 86, in __init__ + self.dbPrefix = map(lambda X: X.prefix, self.dbInfos) + File "/node_apps/www/cgi-bin/searchPage.py", line 86, in++ self.dbPrefix = map(lambda X: X.prefix, self.dbInfos) +AttributeError: 'NoneType' object has no attribute 'prefix' + +
+ +
Traceback (most recent call last): + File "/node_apps/www/webqtl/main.py", line 162, in ? + page = SearchResultPage(fd) + File "/node_apps/www/cgi-bin/searchPage.py", line 86, in __init__ + self.dbPrefix = map(lambda X: X.prefix, self.dbInfos) + File "/node_apps/www/cgi-bin/searchPage.py", line 86, in++ self.dbPrefix = map(lambda X: X.prefix, self.dbInfos) +AttributeError: 'NoneType' object has no attribute 'prefix' + +
+ +
Traceback (most recent call last): + File "/node_apps/www/webqtl/main.py", line 162, in ? + page = SearchResultPage(fd) + File "/node_apps/www/cgi-bin/searchPage.py", line 86, in __init__ + self.dbPrefix = map(lambda X: X.prefix, self.dbInfos) + File "/node_apps/www/cgi-bin/searchPage.py", line 86, in++ self.dbPrefix = map(lambda X: X.prefix, self.dbInfos) +AttributeError: 'NoneType' object has no attribute 'prefix' + +
+ +
Traceback (most recent call last): + File "/node_apps/www/webqtl/main.py", line 162, in ? + page = SearchResultPage(fd) + File "/node_apps/www/cgi-bin/searchPage.py", line 86, in __init__ + self.dbPrefix = map(lambda X: X.prefix, self.dbInfos) + File "/node_apps/www/cgi-bin/searchPage.py", line 86, in++ self.dbPrefix = map(lambda X: X.prefix, self.dbInfos) +AttributeError: 'NoneType' object has no attribute 'prefix' + +
+ +
Traceback (most recent call last): + File "/home/hqli/public_html/cgi-bin/beta/main.py", line 162, in ? + page = SearchResultPage(fd) + File "/home/hqli/public_html/cgi-bin/beta/searchPage.py", line 493, in __init__ + self.cursor.execute(item) + File "/usr/lib/python2.3/site-packages/MySQLdb/cursors.py", line 137, in execute + self.errorhandler(self, exc, value) + File "/usr/lib/python2.3/site-packages/MySQLdb/connections.py", line 33, in defaulterrorhandler + raise errorclass, errorvalue +ProgrammingError: (1064, "You have an error in your SQL syntax; check the manual that corresponds to your MySQL server version for the right syntax to use near 'GROUP BY Table1.Name) as CombineTable WHERE ProbeSet.Id = ProbeSetXRef.ProbeSetI' at line 1") + ++
+ +
Traceback (most recent call last): + File "/home/hqli/public_html/cgi-bin/beta/main.py", line 162, in ? + page = SearchResultPage(fd) + File "/home/hqli/public_html/cgi-bin/beta/searchPage.py", line 493, in __init__ + self.cursor.execute(item) + File "/usr/lib/python2.3/site-packages/MySQLdb/cursors.py", line 137, in execute + self.errorhandler(self, exc, value) + File "/usr/lib/python2.3/site-packages/MySQLdb/connections.py", line 33, in defaulterrorhandler + raise errorclass, errorvalue +ProgrammingError: (1064, "You have an error in your SQL syntax; check the manual that corresponds to your MySQL server version for the right syntax to use near 'GROUP BY Table1.Name) as CombineTable WHERE ProbeSet.Id = ProbeSetXRef.ProbeSetI' at line 1") + ++
+ +
Traceback (most recent call last): + File "/home/hqli/public_html/cgi-bin/beta/main.py", line 162, in ? + page = SearchResultPage(fd) + File "/home/hqli/public_html/cgi-bin/beta/searchPage.py", line 493, in __init__ + self.cursor.execute(item) + File "/usr/lib/python2.3/site-packages/MySQLdb/cursors.py", line 137, in execute + self.errorhandler(self, exc, value) + File "/usr/lib/python2.3/site-packages/MySQLdb/connections.py", line 33, in defaulterrorhandler + raise errorclass, errorvalue +ProgrammingError: (1064, "You have an error in your SQL syntax; check the manual that corresponds to your MySQL server version for the right syntax to use near 'GROUP BY Table1.Name) as CombineTable WHERE ProbeSet.Id = ProbeSetXRef.ProbeSetI' at line 1") + ++
+ +
Traceback (most recent call last): + File "./cmdLine.py", line 120, in ? + page = MultipleIntMappingPage(fd) + File "/node_apps/www/cgi-bin/beta/intervalPage.py", line 2733, in __init__ + IntMappingPage.__init__(self,fd) + File "/node_apps/www/cgi-bin/beta/intervalPage.py", line 228, in __init__ + LRSArray = _genotype.permutation(strains = _strains, trait = _vals, nperm=fd.nperm) +IndexError: the length of the strain list and the value list are different, +or they are less than 8 + ++
+ +
Traceback (most recent call last): + File "/home/hqli/public_html/cgi-bin/beta/main.py", line 162, in ? + page = SearchResultPage(fd) + File "/home/hqli/public_html/cgi-bin/beta/searchPage.py", line 493, in __init__ + self.cursor.execute(item) + File "/usr/lib/python2.3/site-packages/MySQLdb/cursors.py", line 137, in execute + self.errorhandler(self, exc, value) + File "/usr/lib/python2.3/site-packages/MySQLdb/connections.py", line 33, in defaulterrorhandler + raise errorclass, errorvalue +ProgrammingError: (1064, "You have an error in your SQL syntax; check the manual that corresponds to your MySQL server version for the right syntax to use near 'GROUP BY Table1.Name) as CombineTable WHERE ProbeSet.Id = ProbeSetXRef.ProbeSetI' at line 1") + ++
+ +
Traceback (most recent call last): + File "/home/hqli/public_html/cgi-bin/beta/main.py", line 162, in ? + page = SearchResultPage(fd) + File "/home/hqli/public_html/cgi-bin/beta/searchPage.py", line 494, in __init__ + self.cursor.execute(item) + File "/usr/lib/python2.3/site-packages/MySQLdb/cursors.py", line 137, in execute + self.errorhandler(self, exc, value) + File "/usr/lib/python2.3/site-packages/MySQLdb/connections.py", line 33, in defaulterrorhandler + raise errorclass, errorvalue +ProgrammingError: (1064, "You have an error in your SQL syntax; check the manual that corresponds to your MySQL server version for the right syntax to use near 'GROUP BY Table1.Name) as CombineTable WHERE ProbeSet.Id = ProbeSetXRef.ProbeSetI' at line 1") + ++
+ +
Traceback (most recent call last): + File "./cmdLine.py", line 146, in ? + page3 = MultipleIntMappingPage(fd) + File "/node_apps/www/cgi-bin/intervalPage.py", line 2733, in __init__ + IntMappingPage.__init__(self,fd) + File "/node_apps/www/cgi-bin/intervalPage.py", line 358, in __init__ + gifmap = self.plotIntMapping(intCanvas, _LRSResult, _bootResult, fd, offset = (75, 120, 80, 10)) + File "/node_apps/www/cgi-bin/intervalPage.py", line 2374, in plotIntMapping + additiveStep = (additiveScale[1]-additiveScale[0])/additiveScale[2] +TypeError: unsubscriptable object + ++
+ +
Traceback (most recent call last): + File "./cmdLine.py", line 146, in ? + page3 = MultipleIntMappingPage(fd) + File "/node_apps/www/cgi-bin/intervalPage.py", line 2733, in __init__ + IntMappingPage.__init__(self,fd) + File "/node_apps/www/cgi-bin/intervalPage.py", line 358, in __init__ + gifmap = self.plotIntMapping(intCanvas, _LRSResult, _bootResult, fd, offset = (75, 120, 80, 10)) + File "/node_apps/www/cgi-bin/intervalPage.py", line 2374, in plotIntMapping + additiveStep = (additiveScale[1]-additiveScale[0])/additiveScale[2] +TypeError: unsubscriptable object + ++
+ +
Traceback (most recent call last): + File "./cmdLine.py", line 146, in ? + page3 = MultipleIntMappingPage(fd) + File "/node_apps/www/cgi-bin/intervalPage.py", line 2733, in __init__ + IntMappingPage.__init__(self,fd) + File "/node_apps/www/cgi-bin/intervalPage.py", line 226, in __init__ + LRSArray = _genotype.permutation(strains = _strains, trait = _vals, variance = _vars, nperm=fd.nperm) +IndexError: the length of the strain list and the value list are different, +or they are less than 8 + ++
+ +
Traceback (most recent call last): + File "./cmdLine.py", line 146, in ? + page3 = MultipleIntMappingPage(fd) + File "/node_apps/www/cgi-bin/intervalPage.py", line 2733, in __init__ + IntMappingPage.__init__(self,fd) + File "/node_apps/www/cgi-bin/intervalPage.py", line 358, in __init__ + gifmap = self.plotIntMapping(intCanvas, _LRSResult, _bootResult, fd, offset = (75, 120, 80, 10)) + File "/node_apps/www/cgi-bin/intervalPage.py", line 2374, in plotIntMapping + additiveStep = (additiveScale[1]-additiveScale[0])/additiveScale[2] +TypeError: unsubscriptable object + ++
+ +
Traceback (most recent call last): + File "./cmdLine.py", line 120, in ? + page = MultipleIntMappingPage(fd) + File "/node_apps/www/cgi-bin/beta/intervalPage.py", line 2733, in __init__ + IntMappingPage.__init__(self,fd) + File "/node_apps/www/cgi-bin/beta/intervalPage.py", line 228, in __init__ + LRSArray = _genotype.permutation(strains = _strains, trait = _vals, nperm=fd.nperm) +IndexError: the length of the strain list and the value list are different, +or they are less than 8 + ++
+ +
Traceback (most recent call last): + File "/node_apps/www/cgi-bin/Yanhua/main.py", line 170, in ? + page = ShowDatabasePage(fd) + File "/node_apps/www/cgi-bin/Yanhua/dataPage.py", line 930, in __init__ + fd.readGenotype() + File "/node_apps/www/cgi-bin/Yanhua/DataForm.py", line 132, in readGenotype + self.genotype_1.read(os.path.join(CONFIG_genodir, self.RISet + '.geno')) +SystemError: The given file doesn't exist + ++
+ +
Traceback (most recent call last): + File "/home/hqli/public_html/cgi-bin/beta/main.py", line 170, in ? + page = ShowDatabasePage(fd) + File "/home/hqli/public_html/cgi-bin/beta/dataPage.py", line 882, in __init__ + fd.readGenotype() + File "/home/hqli/public_html/cgi-bin/beta/DataForm.py", line 131, in readGenotype + self.genotype_1.read(os.path.join(CONFIG_genodir, self.RISet + '.geno')) +SystemError: The given file doesn't exist + ++
+ +
Traceback (most recent call last): + File "/node_apps/www/cgi-bin/Yanhua/main.py", line 170, in ? + page = ShowDatabasePage(fd) + File "/node_apps/www/cgi-bin/Yanhua/dataPage.py", line 930, in __init__ + fd.readGenotype() + File "/node_apps/www/cgi-bin/Yanhua/DataForm.py", line 132, in readGenotype + self.genotype_1.read(os.path.join(CONFIG_genodir, self.RISet + '.geno')) +SystemError: The given file doesn't exist + ++
+ +
Traceback (most recent call last): + File "/node_apps/www/cgi-bin/Yanhua/main.py", line 170, in ? + page = ShowDatabasePage(fd) + File "/node_apps/www/cgi-bin/Yanhua/dataPage.py", line 930, in __init__ + fd.readGenotype() + File "/node_apps/www/cgi-bin/Yanhua/DataForm.py", line 132, in readGenotype + self.genotype_1.read(os.path.join(CONFIG_genodir, self.RISet + '.geno')) +SystemError: The given file doesn't exist + ++
+ +
Traceback (most recent call last): + File "/node_apps/www/webqtl/main.py", line 33, in ? + fd = FormData(formdata) + File "/node_apps/www/cgi-bin/DataForm.py", line 99, in __init__ + f1, self.mpolar, self.ppolar = ParInfo[self.RISet] +KeyError: 'BDF2-2005' + ++
+ +
Traceback (most recent call last): + File "/node_apps/www/webqtl/main.py", line 33, in ? + fd = FormData(formdata) + File "/node_apps/www/cgi-bin/DataForm.py", line 99, in __init__ + f1, self.mpolar, self.ppolar = ParInfo[self.RISet] +KeyError: 'BDF2-2005' + ++
+ +
Traceback (most recent call last): + File "/home/hqli/public_html/cgi-bin/beta/main.py", line 170, in ? + page = ShowDatabasePage(fd) + File "/home/hqli/public_html/cgi-bin/beta/dataPage.py", line 882, in __init__ + fd.readGenotype() + File "/home/hqli/public_html/cgi-bin/beta/DataForm.py", line 131, in readGenotype + self.genotype_1.read(os.path.join(CONFIG_genodir, self.RISet + '.geno')) +SystemError: The given file doesn't exist + ++
+ +
Traceback (most recent call last): + File "/home/hqli/public_html/cgi-bin/beta/main.py", line 160, in ? + from searchPage import * + File "/home/hqli/public_html/cgi-bin/beta/searchPage.py", line 495 + print item,+
+ ^ + SyntaxError: invalid syntax + +
+ +
Traceback (most recent call last): + File "./cmdLine.py", line 120, in ? + page = MultipleIntMappingPage(fd) + File "/node_apps/www/cgi-bin/intervalPage.py", line 2733, in __init__ + IntMappingPage.__init__(self,fd) + File "/node_apps/www/cgi-bin/intervalPage.py", line 228, in __init__ + LRSArray = _genotype.permutation(strains = _strains, trait = _vals, nperm=fd.nperm) +IndexError: the length of the strain list and the value list are different, +or they are less than 8 + ++
+ +
Traceback (most recent call last): + File "./cmdLine.py", line 120, in ? + page = MultipleIntMappingPage(fd) + File "/node_apps/www/cgi-bin/intervalPage.py", line 2733, in __init__ + IntMappingPage.__init__(self,fd) + File "/node_apps/www/cgi-bin/intervalPage.py", line 228, in __init__ + LRSArray = _genotype.permutation(strains = _strains, trait = _vals, nperm=fd.nperm) +IndexError: the length of the strain list and the value list are different, +or they are less than 8 + ++
+ +
Traceback (most recent call last): + File "./cmdLine.py", line 120, in ? + page = MultipleIntMappingPage(fd) + File "/node_apps/www/cgi-bin/beta/intervalPage.py", line 2815, in __init__ + LRSResult = _genotype.regression(_strains, _vals) +IndexError: the length of the strain list and the value list are different, +or they are less than 8 + ++
+ +
Traceback (most recent call last): + File "./cmdLine.py", line 120, in ? + page = MultipleIntMappingPage(fd) + File "/node_apps/www/cgi-bin/beta/intervalPage.py", line 2733, in __init__ + IntMappingPage.__init__(self,fd) + File "/node_apps/www/cgi-bin/beta/intervalPage.py", line 228, in __init__ + LRSArray = _genotype.permutation(strains = _strains, trait = _vals, nperm=fd.nperm) +IndexError: the length of the strain list and the value list are different, +or they are less than 8 + ++
+ +
Traceback (most recent call last): + File "./cmdLine.py", line 120, in ? + page = MultipleIntMappingPage(fd) + File "/node_apps/www/cgi-bin/beta/intervalPage.py", line 2733, in __init__ + IntMappingPage.__init__(self,fd) + File "/node_apps/www/cgi-bin/beta/intervalPage.py", line 228, in __init__ + LRSArray = _genotype.permutation(strains = _strains, trait = _vals, nperm=fd.nperm) +IndexError: the length of the strain list and the value list are different, +or they are less than 8 + ++
+ +
Traceback (most recent call last): + File "./cmdLine.py", line 120, in ? + page = MultipleIntMappingPage(fd) + File "/node_apps/www/cgi-bin/beta/intervalPage.py", line 2733, in __init__ + IntMappingPage.__init__(self,fd) + File "/node_apps/www/cgi-bin/beta/intervalPage.py", line 228, in __init__ + LRSArray = _genotype.permutation(strains = _strains, trait = _vals, nperm=fd.nperm) +IndexError: the length of the strain list and the value list are different, +or they are less than 8 + ++
+ +
Traceback (most recent call last): + File "./cmdLine.py", line 120, in ? + page = MultipleIntMappingPage(fd) + File "/node_apps/www/cgi-bin/beta/intervalPage.py", line 2733, in __init__ + IntMappingPage.__init__(self,fd) + File "/node_apps/www/cgi-bin/beta/intervalPage.py", line 228, in __init__ + LRSArray = _genotype.permutation(strains = _strains, trait = _vals, nperm=fd.nperm) +IndexError: the length of the strain list and the value list are different, +or they are less than 8 + ++
+ +
Traceback (most recent call last): + File "./cmdLine.py", line 146, in ? + page3 = MultipleIntMappingPage(fd) + File "/node_apps/www/cgi-bin/beta/intervalPage.py", line 2733, in __init__ + IntMappingPage.__init__(self,fd) + File "/node_apps/www/cgi-bin/beta/intervalPage.py", line 228, in __init__ + LRSArray = _genotype.permutation(strains = _strains, trait = _vals, nperm=fd.nperm) +IndexError: the length of the strain list and the value list are different, +or they are less than 8 + ++
+ +
Traceback (most recent call last): + File "/node_apps/www/webqtl/main.py", line 136, in ? + page = editHtmlPage(fd) + File "/node_apps/www/cgi-bin/upddataPage.py", line 1060, in __init__ + fp = open(fileName, 'wb') +IOError: [Errno 2] No such file or directory: '/node_apps/www/html/webqtl//webqtl/main.py' + ++
+ +
Traceback (most recent call last): + File "./cmdLine.py", line 120, in ? + page = MultipleIntMappingPage(fd) + File "/node_apps/www/cgi-bin/beta/intervalPage.py", line 2815, in __init__ + LRSResult = _genotype.regression(_strains, _vals) +IndexError: the length of the strain list and the value list are different, +or they are less than 8 + ++
+ +
Traceback (most recent call last): + File "./cmdLine.py", line 120, in ? + page = MultipleIntMappingPage(fd) + File "/node_apps/www/cgi-bin/beta/intervalPage.py", line 2733, in __init__ + IntMappingPage.__init__(self,fd) + File "/node_apps/www/cgi-bin/beta/intervalPage.py", line 228, in __init__ + LRSArray = _genotype.permutation(strains = _strains, trait = _vals, nperm=fd.nperm) +IndexError: the length of the strain list and the value list are different, +or they are less than 8 + ++
+ +
Traceback (most recent call last): + File "./cmdLine.py", line 120, in ? + page = MultipleIntMappingPage(fd) + File "/node_apps/www/cgi-bin/beta/intervalPage.py", line 2815, in __init__ + LRSResult = _genotype.regression(_strains, _vals) +IndexError: the length of the strain list and the value list are different, +or they are less than 8 + ++
+ +
Traceback (most recent call last): + File "./cmdLine.py", line 146, in ? + page3 = MultipleIntMappingPage(fd) + File "/node_apps/www/cgi-bin/intervalPage.py", line 2733, in __init__ + IntMappingPage.__init__(self,fd) + File "/node_apps/www/cgi-bin/intervalPage.py", line 358, in __init__ + gifmap = self.plotIntMapping(intCanvas, _LRSResult, _bootResult, fd, offset = (75, 120, 80, 10)) + File "/node_apps/www/cgi-bin/intervalPage.py", line 2374, in plotIntMapping + additiveStep = (additiveScale[1]-additiveScale[0])/additiveScale[2] +TypeError: unsubscriptable object + ++
+ +
Traceback (most recent call last): + File "./cmdLine.py", line 146, in ? + page3 = MultipleIntMappingPage(fd) + File "/node_apps/www/cgi-bin/intervalPage.py", line 2733, in __init__ + IntMappingPage.__init__(self,fd) + File "/node_apps/www/cgi-bin/intervalPage.py", line 358, in __init__ + gifmap = self.plotIntMapping(intCanvas, _LRSResult, _bootResult, fd, offset = (75, 120, 80, 10)) + File "/node_apps/www/cgi-bin/intervalPage.py", line 2374, in plotIntMapping + additiveStep = (additiveScale[1]-additiveScale[0])/additiveScale[2] +TypeError: unsubscriptable object + ++
+ +
Traceback (most recent call last): + File "./cmdLine.py", line 120, in ? + page = MultipleIntMappingPage(fd) + File "/node_apps/www/cgi-bin/intervalPage.py", line 2815, in __init__ + LRSResult = _genotype.regression(_strains, _vals) +IndexError: the length of the strain list and the value list are different, +or they are less than 8 + ++
+ +
Traceback (most recent call last): + File "./cmdLine.py", line 120, in ? + page = MultipleIntMappingPage(fd) +NameError: name 'MultipleIntMappingPage' is not defined + ++
+ +
Traceback (most recent call last): + File "/node_apps/www/webqtl/main.py", line 162, in ? + page = SearchResultPage(fd) + File "/node_apps/www/cgi-bin/searchPage.py", line 435, in __init__ + self.cursor.execute(item) + File "/usr/lib/python2.3/site-packages/MySQLdb/cursors.py", line 137, in execute + self.errorhandler(self, exc, value) + File "/usr/lib/python2.3/site-packages/MySQLdb/connections.py", line 33, in defaulterrorhandler + raise errorclass, errorvalue +OperationalError: (1139, "Got error 'parentheses not balanced' from regexp") + ++
+ +
Traceback (most recent call last): + File "/node_apps/www/webqtl/main.py", line 73, in ? + page = ResultsPage(fd) + File "/node_apps/www/cgi-bin/resultPage.py", line 153, in __init__ + resultstable = self.GenReport(fd, _genotype, _strains, _vals, _vars) + File "/node_apps/www/cgi-bin/resultPage.py", line 163, in GenReport + qtlresults = _genotype.regression(strains = _strains, trait = _vals) +IndexError: the length of the strain list and the value list are different, +or they are less than 8 + ++
+ +
Traceback (most recent call last): + File "/node_apps/www/webqtl/main.py", line 73, in ? + page = ResultsPage(fd) + File "/node_apps/www/cgi-bin/resultPage.py", line 153, in __init__ + resultstable = self.GenReport(fd, _genotype, _strains, _vals, _vars) + File "/node_apps/www/cgi-bin/resultPage.py", line 163, in GenReport + qtlresults = _genotype.regression(strains = _strains, trait = _vals) +IndexError: the length of the strain list and the value list are different, +or they are less than 8 + ++
+ +
Traceback (most recent call last): + File "./cmdLine.py", line 140, in ? + page2 = CorrelationPage(fd) + File "/node_apps/www/cgi-bin/correlationPage.py", line 116, in __init__ + self.cursor.execute(query) + File "/usr/lib/python2.3/site-packages/MySQLdb/cursors.py", line 137, in execute + self.errorhandler(self, exc, value) + File "/usr/lib/python2.3/site-packages/MySQLdb/connections.py", line 33, in defaulterrorhandler + raise errorclass, errorvalue +ProgrammingError: (1146, "Table 'db_webqtl.ProbeSetXRef' doesn't exist") + ++
+ +
Traceback (most recent call last): + File "./cmdLine.py", line 140, in ? + page2 = CorrelationPage(fd) + File "/node_apps/www/cgi-bin/correlationPage.py", line 116, in __init__ + self.cursor.execute(query) + File "/usr/lib/python2.3/site-packages/MySQLdb/cursors.py", line 137, in execute + self.errorhandler(self, exc, value) + File "/usr/lib/python2.3/site-packages/MySQLdb/connections.py", line 33, in defaulterrorhandler + raise errorclass, errorvalue +ProgrammingError: (1146, "Table 'db_webqtl.ProbeSetXRef' doesn't exist") + ++
+ +
Traceback (most recent call last): + File "./cmdLine.py", line 124, in ? + page=CorrelationPage(fd) + File "/node_apps/www/cgi-bin/correlationPage.py", line 116, in __init__ + self.cursor.execute(query) + File "/usr/lib/python2.3/site-packages/MySQLdb/cursors.py", line 137, in execute + self.errorhandler(self, exc, value) + File "/usr/lib/python2.3/site-packages/MySQLdb/connections.py", line 33, in defaulterrorhandler + raise errorclass, errorvalue +ProgrammingError: (1146, "Table 'db_webqtl.ProbeSetXRef' doesn't exist") + ++
+ +
Traceback (most recent call last): + File "./cmdLine.py", line 124, in ? + page=CorrelationPage(fd) + File "/node_apps/www/cgi-bin/correlationPage.py", line 116, in __init__ + self.cursor.execute(query) + File "/usr/lib/python2.3/site-packages/MySQLdb/cursors.py", line 137, in execute + self.errorhandler(self, exc, value) + File "/usr/lib/python2.3/site-packages/MySQLdb/connections.py", line 33, in defaulterrorhandler + raise errorclass, errorvalue +OperationalError: (1017, "Can't find file: './db_webqtl/ProbeSetXRef.frm' (errno: 13)") + ++
+ +
Traceback (most recent call last): + File "./cmdLine.py", line 120, in ? + page = MultipleIntMappingPage(fd) + File "/node_apps/www/cgi-bin/intervalPage.py", line 2815, in __init__ + LRSResult = _genotype.regression(_strains, _vals) +IndexError: the length of the strain list and the value list are different, +or they are less than 8 + ++
+ +
Traceback (most recent call last): + File "./cmdLine.py", line 146, in ? + page3 = MultipleIntMappingPage(fd) + File "/node_apps/www/cgi-bin/intervalPage.py", line 2733, in __init__ + IntMappingPage.__init__(self,fd) + File "/node_apps/www/cgi-bin/intervalPage.py", line 358, in __init__ + gifmap = self.plotIntMapping(intCanvas, _LRSResult, _bootResult, fd, offset = (75, 120, 80, 10)) + File "/node_apps/www/cgi-bin/intervalPage.py", line 2374, in plotIntMapping + additiveStep = (additiveScale[1]-additiveScale[0])/additiveScale[2] +TypeError: unsubscriptable object + ++
+ +
Traceback (most recent call last): + File "./cmdLine.py", line 120, in ? + page = MultipleIntMappingPage(fd) + File "/node_apps/www/cgi-bin/intervalPage.py", line 2815, in __init__ + LRSResult = _genotype.regression(_strains, _vals) +IndexError: the length of the strain list and the value list are different, +or they are less than 8 + ++
+ +
Traceback (most recent call last): + File "./cmdLine.py", line 120, in ? + page = MultipleIntMappingPage(fd) + File "/node_apps/www/cgi-bin/intervalPage.py", line 2815, in __init__ + LRSResult = _genotype.regression(_strains, _vals) +IndexError: the length of the strain list and the value list are different, +or they are less than 8 + ++
+ +
Traceback (most recent call last): + File "/home/hqli/public_html/cgi-bin/beta/main.py", line 160, in ? + from searchPage import * + File "/home/hqli/public_html/cgi-bin/beta/searchPage.py", line 16 + thekeys = fd.keys + ^ + SyntaxError: invalid syntax + ++
+ +
Traceback (most recent call last): + File "/home/hqli/public_html/cgi-bin/beta/main.py", line 160, in ? + from searchPage import * + File "/home/hqli/public_html/cgi-bin/beta/searchPage.py", line 16 + for key in fd.keys: + ^ + SyntaxError: invalid syntax + ++
+ +
Traceback (most recent call last): + File "/home/hqli/public_html/cgi-bin/beta/main.py", line 160, in ? + from searchPage import * + File "/home/hqli/public_html/cgi-bin/beta/searchPage.py", line 16 + for akey in fd.formdata.keys: + ^ + SyntaxError: invalid syntax + ++
+ +
Traceback (most recent call last): + File "/home/hqli/public_html/cgi-bin/beta/main.py", line 160, in ? + from searchPage import * + File "/home/hqli/public_html/cgi-bin/beta/searchPage.py", line 17 + print fd.formdata.keys + ^ + SyntaxError: invalid syntax + ++
+ +
Traceback (most recent call last): + File "/home/hqli/public_html/cgi-bin/beta/main.py", line 160, in ? + from searchPage import * + File "/home/hqli/public_html/cgi-bin/beta/searchPage.py", line 17 + print 'fd.formdata.keys' + ^ + SyntaxError: invalid syntax + ++
+ +
Traceback (most recent call last):
+ File "/home/hqli/public_html/cgi-bin/beta/main.py", line 160, in ?
+ from searchPage import *
+ File "/home/hqli/public_html/cgi-bin/beta/searchPage.py", line 16
+ self.database = fd.formdata.getvalue('database', '')
+ ^
+ SyntaxError: invalid syntax
+
+
++ +
Traceback (most recent call last): + File "/home/hqli/public_html/cgi-bin/beta/main.py", line 162, in ? + page = SearchResultPage(fd) + File "/home/hqli/public_html/cgi-bin/beta/searchPage.py", line 16, in __init__ + print fd.formdata.keys.length +AttributeError: 'function' object has no attribute 'length' + ++
+ +
Traceback (most recent call last): + File "/home/hqli/public_html/cgi-bin/beta/main.py", line 162, in ? + page = SearchResultPage(fd) + File "/home/hqli/public_html/cgi-bin/beta/searchPage.py", line 16, in __init__ + print length(fd.formdata.keys) +NameError: global name 'length' is not defined + ++
+ +
Traceback (most recent call last): + File "/home/hqli/public_html/cgi-bin/beta/main.py", line 162, in ? + page = SearchResultPage(fd) + File "/home/hqli/public_html/cgi-bin/beta/searchPage.py", line 16, in __init__ + print len(fd.formdata.keys) +TypeError: len() of unsized object + ++
+ +
Traceback (most recent call last): + File "/home/hqli/public_html/cgi-bin/beta/main.py", line 162, in ? + page = SearchResultPage(fd) + File "/home/hqli/public_html/cgi-bin/beta/searchPage.py", line 16, in __init__ + print len(fd.formdata.list()) +TypeError: 'list' object is not callable + ++
+ +
Traceback (most recent call last): + File "/home/hqli/public_html/cgi-bin/beta/main.py", line 162, in ? + page = SearchResultPage(fd) + File "/home/hqli/public_html/cgi-bin/beta/searchPage.py", line 16, in __init__ + print len(fd.formdata.getlist()) +TypeError: getlist() takes exactly 2 arguments (1 given) + ++
+ +
Traceback (most recent call last): + File "/home/hqli/public_html/cgi-bin/beta/main.py", line 162, in ? + page = SearchResultPage(fd) + File "/home/hqli/public_html/cgi-bin/beta/searchPage.py", line 16, in __init__ + print fd.formdata.getkeys() + File "/usr/src/build/475206-i386/install/usr/lib/python2.3/cgi.py", line 533, in __getattr__ + raise AttributeError, name +AttributeError: getkeys + ++
+ +
Traceback (most recent call last):
+ File "/home/hqli/public_html/cgi-bin/beta/main.py", line 162, in ?
+ page = SearchResultPage(fd)
+ File "/home/hqli/public_html/cgi-bin/beta/searchPage.py", line 18, in __init__
+ print fd.formdata.getValue('database')
+ File "/usr/src/build/475206-i386/install/usr/lib/python2.3/cgi.py", line 533, in __getattr__
+ raise AttributeError, name
+AttributeError: getValue
+
+
++ +
Traceback (most recent call last): + File "/node_apps/www/webqtl/main.py", line 170, in ? + page = ShowDatabasePage(fd) + File "/node_apps/www/cgi-bin/dataPage.py", line 945, in __init__ + nstrains = [[None]] * len(traitdata) +TypeError: len() of unsized object + ++
+ +
Traceback (most recent call last): + File "/node_apps/www/webqtl/main.py", line 303, in ? + page = cmdCorrelation(fd) + File "/node_apps/www/cgi-bin/TextUI.py", line 433, in __init__ + self.readDB() + File "/node_apps/www/cgi-bin/TextUI.py", line 555, in readDB + self.cursor.execute(query) + File "/usr/lib/python2.3/site-packages/MySQLdb/cursors.py", line 137, in execute + self.errorhandler(self, exc, value) + File "/usr/lib/python2.3/site-packages/MySQLdb/connections.py", line 33, in defaulterrorhandler + raise errorclass, errorvalue +OperationalError: (1054, "Unknown column 'LocusID' in 'field list'") + ++
+ +
Traceback (most recent call last): + File "/node_apps/www/webqtl/main.py", line 303, in ? + page = cmdCorrelation(fd) + File "/node_apps/www/cgi-bin/TextUI.py", line 433, in __init__ + self.readDB() + File "/node_apps/www/cgi-bin/TextUI.py", line 555, in readDB + self.cursor.execute(query) + File "/usr/lib/python2.3/site-packages/MySQLdb/cursors.py", line 137, in execute + self.errorhandler(self, exc, value) + File "/usr/lib/python2.3/site-packages/MySQLdb/connections.py", line 33, in defaulterrorhandler + raise errorclass, errorvalue +OperationalError: (1054, "Unknown column 'LocusID' in 'field list'") + ++
+ +
Traceback (most recent call last): + File "/node_apps/www/webqtl/main.py", line 162, in ? + page = SearchResultPage(fd) + File "/node_apps/www/cgi-bin/searchPage.py", line 77, in __init__ + self.databaseCrosses, self.databaseCrossIds= self.cursor.fetchall()[0] +IndexError: tuple index out of range + ++
+ +
Traceback (most recent call last): + File "/node_apps/www/webqtl/main.py", line 170, in ? + page = ShowDatabasePage(fd) + File "/node_apps/www/cgi-bin/dataPage.py", line 872, in __init__ + fd.RISet = self.cursor.fetchall()[0][0] +IndexError: tuple index out of range + ++
+ +
Traceback (most recent call last): + File "/node_apps/www/webqtl/main.py", line 170, in ? + page = ShowDatabasePage(fd) + File "/node_apps/www/cgi-bin/dataPage.py", line 872, in __init__ + fd.RISet = self.cursor.fetchall()[0][0] +IndexError: tuple index out of range + ++
+ +
Traceback (most recent call last): + File "/node_apps/www/webqtl/main.py", line 170, in ? + page = ShowDatabasePage(fd) + File "/node_apps/www/cgi-bin/dataPage.py", line 872, in __init__ + fd.RISet = self.cursor.fetchall()[0][0] +IndexError: tuple index out of range + ++
+ +
Traceback (most recent call last): + File "/node_apps/www/webqtl/main.py", line 170, in ? + page = ShowDatabasePage(fd) + File "/node_apps/www/cgi-bin/dataPage.py", line 872, in __init__ + fd.RISet = self.cursor.fetchall()[0][0] +IndexError: tuple index out of range + ++
+ +
Traceback (most recent call last): + File "/node_apps/www/webqtl/main.py", line 162, in ? + page = SearchResultPage(fd) + File "/node_apps/www/cgi-bin/searchPage.py", line 77, in __init__ + self.databaseCrosses, self.databaseCrossIds= self.cursor.fetchall()[0] +IndexError: tuple index out of range + ++
+ +
Traceback (most recent call last): + File "/node_apps/www/webqtl/main.py", line 170, in ? + page = ShowDatabasePage(fd) + File "/node_apps/www/cgi-bin/dataPage.py", line 872, in __init__ + fd.RISet = self.cursor.fetchall()[0][0] +IndexError: tuple index out of range + ++
+ +
Traceback (most recent call last): + File "/node_apps/www/webqtl/main.py", line 170, in ? + page = ShowDatabasePage(fd) + File "/node_apps/www/cgi-bin/dataPage.py", line 872, in __init__ + fd.RISet = self.cursor.fetchall()[0][0] +IndexError: tuple index out of range + ++
+ +
Traceback (most recent call last): + File "/node_apps/www/webqtl/main.py", line 162, in ? + page = SearchResultPage(fd) + File "/node_apps/www/cgi-bin/searchPage.py", line 77, in __init__ + self.databaseCrosses, self.databaseCrossIds= self.cursor.fetchall()[0] +IndexError: tuple index out of range + ++
+ +
Traceback (most recent call last): + File "/node_apps/www/webqtl/main.py", line 162, in ? + page = SearchResultPage(fd) + File "/node_apps/www/cgi-bin/searchPage.py", line 77, in __init__ + self.databaseCrosses, self.databaseCrossIds= self.cursor.fetchall()[0] +IndexError: tuple index out of range + ++
+ +
Traceback (most recent call last): + File "/node_apps/www/webqtl/main.py", line 162, in ? + page = SearchResultPage(fd) + File "/node_apps/www/cgi-bin/searchPage.py", line 77, in __init__ + self.databaseCrosses, self.databaseCrossIds= self.cursor.fetchall()[0] +IndexError: tuple index out of range + ++
+ +
Traceback (most recent call last): + File "/node_apps/www/webqtl/main.py", line 162, in ? + page = SearchResultPage(fd) + File "/node_apps/www/cgi-bin/searchPage.py", line 77, in __init__ + self.databaseCrosses, self.databaseCrossIds= self.cursor.fetchall()[0] +IndexError: tuple index out of range + ++
+ +
Traceback (most recent call last): + File "/node_apps/www/webqtl/main.py", line 162, in ? + page = SearchResultPage(fd) + File "/node_apps/www/cgi-bin/searchPage.py", line 77, in __init__ + self.databaseCrosses, self.databaseCrossIds= self.cursor.fetchall()[0] +IndexError: tuple index out of range + ++
+ +
Traceback (most recent call last): + File "/node_apps/www/webqtl/main.py", line 162, in ? + page = SearchResultPage(fd) + File "/node_apps/www/cgi-bin/searchPage.py", line 77, in __init__ + self.databaseCrosses, self.databaseCrossIds= self.cursor.fetchall()[0] +IndexError: tuple index out of range + ++
+ +
Traceback (most recent call last): + File "/node_apps/www/webqtl/main.py", line 162, in ? + page = SearchResultPage(fd) + File "/node_apps/www/cgi-bin/searchPage.py", line 77, in __init__ + self.databaseCrosses, self.databaseCrossIds= self.cursor.fetchall()[0] +IndexError: tuple index out of range + ++
+ +
Traceback (most recent call last): + File "/node_apps/www/webqtl/main.py", line 162, in ? + page = SearchResultPage(fd) + File "/node_apps/www/cgi-bin/searchPage.py", line 77, in __init__ + self.databaseCrosses, self.databaseCrossIds= self.cursor.fetchall()[0] +IndexError: tuple index out of range + ++
+ +
Traceback (most recent call last): + File "/node_apps/www/webqtl/main.py", line 162, in ? + page = SearchResultPage(fd) + File "/node_apps/www/cgi-bin/searchPage.py", line 77, in __init__ + self.databaseCrosses, self.databaseCrossIds= self.cursor.fetchall()[0] +IndexError: tuple index out of range + ++
+ +
Traceback (most recent call last): + File "/node_apps/www/webqtl/main.py", line 162, in ? + page = SearchResultPage(fd) + File "/node_apps/www/cgi-bin/searchPage.py", line 77, in __init__ + self.databaseCrosses, self.databaseCrossIds= self.cursor.fetchall()[0] +IndexError: tuple index out of range + ++
+ +
Traceback (most recent call last): + File "/node_apps/www/webqtl/main.py", line 170, in ? + page = ShowDatabasePage(fd) + File "/node_apps/www/cgi-bin/dataPage.py", line 872, in __init__ + fd.RISet = self.cursor.fetchall()[0][0] +IndexError: tuple index out of range + ++
+ +
Traceback (most recent call last): + File "/node_apps/www/webqtl/main.py", line 162, in ? + page = SearchResultPage(fd) + File "/node_apps/www/cgi-bin/searchPage.py", line 77, in __init__ + self.databaseCrosses, self.databaseCrossIds= self.cursor.fetchall()[0] +IndexError: tuple index out of range + ++
+ +
Traceback (most recent call last): + File "/node_apps/www/webqtl/main.py", line 162, in ? + page = SearchResultPage(fd) + File "/node_apps/www/cgi-bin/searchPage.py", line 77, in __init__ + self.databaseCrosses, self.databaseCrossIds= self.cursor.fetchall()[0] +IndexError: tuple index out of range + ++
+ +
Traceback (most recent call last): + File "/node_apps/www/webqtl/main.py", line 162, in ? + page = SearchResultPage(fd) + File "/node_apps/www/cgi-bin/searchPage.py", line 77, in __init__ + self.databaseCrosses, self.databaseCrossIds= self.cursor.fetchall()[0] +IndexError: tuple index out of range + ++
+ +
Traceback (most recent call last): + File "/node_apps/www/webqtl/main.py", line 162, in ? + page = SearchResultPage(fd) + File "/node_apps/www/cgi-bin/searchPage.py", line 77, in __init__ + self.databaseCrosses, self.databaseCrossIds= self.cursor.fetchall()[0] +IndexError: tuple index out of range + ++
+ +
Traceback (most recent call last): + File "/node_apps/www/webqtl/main.py", line 162, in ? + page = SearchResultPage(fd) + File "/node_apps/www/cgi-bin/searchPage.py", line 77, in __init__ + self.databaseCrosses, self.databaseCrossIds= self.cursor.fetchall()[0] +IndexError: tuple index out of range + ++
+ +
Traceback (most recent call last): + File "/node_apps/www/webqtl/main.py", line 162, in ? + page = SearchResultPage(fd) + File "/node_apps/www/cgi-bin/searchPage.py", line 77, in __init__ + self.databaseCrosses, self.databaseCrossIds= self.cursor.fetchall()[0] +IndexError: tuple index out of range + ++
+ +
Traceback (most recent call last): + File "/node_apps/www/webqtl/main.py", line 170, in ? + page = ShowDatabasePage(fd) + File "/node_apps/www/cgi-bin/dataPage.py", line 872, in __init__ + fd.RISet = self.cursor.fetchall()[0][0] +IndexError: tuple index out of range + ++
+ +
Traceback (most recent call last): + File "/node_apps/www/webqtl/main.py", line 162, in ? + page = SearchResultPage(fd) + File "/node_apps/www/cgi-bin/searchPage.py", line 77, in __init__ + self.databaseCrosses, self.databaseCrossIds= self.cursor.fetchall()[0] +IndexError: tuple index out of range + ++
+ +
Traceback (most recent call last): + File "/node_apps/www/webqtl/main.py", line 162, in ? + page = SearchResultPage(fd) + File "/node_apps/www/cgi-bin/searchPage.py", line 77, in __init__ + self.databaseCrosses, self.databaseCrossIds= self.cursor.fetchall()[0] +IndexError: tuple index out of range + ++
+ +
Traceback (most recent call last): + File "/node_apps/www/webqtl/main.py", line 162, in ? + page = SearchResultPage(fd) + File "/node_apps/www/cgi-bin/searchPage.py", line 77, in __init__ + self.databaseCrosses, self.databaseCrossIds= self.cursor.fetchall()[0] +IndexError: tuple index out of range + ++
+ +
Traceback (most recent call last): + File "/node_apps/www/webqtl/main.py", line 162, in ? + page = SearchResultPage(fd) + File "/node_apps/www/cgi-bin/searchPage.py", line 77, in __init__ + self.databaseCrosses, self.databaseCrossIds= self.cursor.fetchall()[0] +IndexError: tuple index out of range + ++
+ +
Traceback (most recent call last): + File "/node_apps/www/webqtl/main.py", line 162, in ? + page = SearchResultPage(fd) + File "/node_apps/www/cgi-bin/searchPage.py", line 77, in __init__ + self.databaseCrosses, self.databaseCrossIds= self.cursor.fetchall()[0] +IndexError: tuple index out of range + ++
+ +
Traceback (most recent call last): + File "/node_apps/www/webqtl/main.py", line 162, in ? + page = SearchResultPage(fd) + File "/node_apps/www/cgi-bin/searchPage.py", line 77, in __init__ + self.databaseCrosses, self.databaseCrossIds= self.cursor.fetchall()[0] +IndexError: tuple index out of range + ++
+ +
Traceback (most recent call last): + File "/node_apps/www/webqtl/main.py", line 162, in ? + page = SearchResultPage(fd) + File "/node_apps/www/cgi-bin/searchPage.py", line 77, in __init__ + self.databaseCrosses, self.databaseCrossIds= self.cursor.fetchall()[0] +IndexError: tuple index out of range + ++
+ +
Traceback (most recent call last): + File "/node_apps/www/webqtl/main.py", line 162, in ? + page = SearchResultPage(fd) + File "/node_apps/www/cgi-bin/searchPage.py", line 77, in __init__ + self.databaseCrosses, self.databaseCrossIds= self.cursor.fetchall()[0] +IndexError: tuple index out of range + ++
+ +
Traceback (most recent call last): + File "/node_apps/www/webqtl/main.py", line 162, in ? + page = SearchResultPage(fd) + File "/node_apps/www/cgi-bin/searchPage.py", line 77, in __init__ + self.databaseCrosses, self.databaseCrossIds= self.cursor.fetchall()[0] +IndexError: tuple index out of range + ++
+ +
Traceback (most recent call last): + File "/node_apps/www/webqtl/main.py", line 162, in ? + page = SearchResultPage(fd) + File "/node_apps/www/cgi-bin/searchPage.py", line 77, in __init__ + self.databaseCrosses, self.databaseCrossIds= self.cursor.fetchall()[0] +IndexError: tuple index out of range + ++
+ +
Traceback (most recent call last): + File "/node_apps/www/webqtl/main.py", line 162, in ? + page = SearchResultPage(fd) + File "/node_apps/www/cgi-bin/searchPage.py", line 77, in __init__ + self.databaseCrosses, self.databaseCrossIds= self.cursor.fetchall()[0] +IndexError: tuple index out of range + ++
+ +
Traceback (most recent call last): + File "/node_apps/www/webqtl/main.py", line 162, in ? + page = SearchResultPage(fd) + File "/node_apps/www/cgi-bin/searchPage.py", line 77, in __init__ + self.databaseCrosses, self.databaseCrossIds= self.cursor.fetchall()[0] +IndexError: tuple index out of range + ++
+ +
Traceback (most recent call last): + File "/node_apps/www/webqtl/main.py", line 303, in ? + page = cmdCorrelation(fd) + File "/node_apps/www/cgi-bin/TextUI.py", line 433, in __init__ + self.readDB() + File "/node_apps/www/cgi-bin/TextUI.py", line 555, in readDB + self.cursor.execute(query) + File "/usr/lib/python2.3/site-packages/MySQLdb/cursors.py", line 137, in execute + self.errorhandler(self, exc, value) + File "/usr/lib/python2.3/site-packages/MySQLdb/connections.py", line 33, in defaulterrorhandler + raise errorclass, errorvalue +OperationalError: (1054, "Unknown column 'LocusID' in 'field list'") + ++
+ +
Traceback (most recent call last): + File "/node_apps/www/webqtl/main.py", line 303, in ? + page = cmdCorrelation(fd) + File "/node_apps/www/cgi-bin/TextUI.py", line 433, in __init__ + self.readDB() + File "/node_apps/www/cgi-bin/TextUI.py", line 555, in readDB + self.cursor.execute(query) + File "/usr/lib/python2.3/site-packages/MySQLdb/cursors.py", line 137, in execute + self.errorhandler(self, exc, value) + File "/usr/lib/python2.3/site-packages/MySQLdb/connections.py", line 33, in defaulterrorhandler + raise errorclass, errorvalue +OperationalError: (1054, "Unknown column 'LocusID' in 'field list'") + ++
+ +
Traceback (most recent call last): + File "/node_apps/www/webqtl/main.py", line 303, in ? + page = cmdCorrelation(fd) + File "/node_apps/www/cgi-bin/TextUI.py", line 433, in __init__ + self.readDB() + File "/node_apps/www/cgi-bin/TextUI.py", line 555, in readDB + self.cursor.execute(query) + File "/usr/lib/python2.3/site-packages/MySQLdb/cursors.py", line 137, in execute + self.errorhandler(self, exc, value) + File "/usr/lib/python2.3/site-packages/MySQLdb/connections.py", line 33, in defaulterrorhandler + raise errorclass, errorvalue +OperationalError: (1054, "Unknown column 'LocusID' in 'field list'") + ++
+ +
Traceback (most recent call last): + File "/node_apps/www/webqtl/main.py", line 303, in ? + page = cmdCorrelation(fd) + File "/node_apps/www/cgi-bin/TextUI.py", line 433, in __init__ + self.readDB() + File "/node_apps/www/cgi-bin/TextUI.py", line 555, in readDB + self.cursor.execute(query) + File "/usr/lib/python2.3/site-packages/MySQLdb/cursors.py", line 137, in execute + self.errorhandler(self, exc, value) + File "/usr/lib/python2.3/site-packages/MySQLdb/connections.py", line 33, in defaulterrorhandler + raise errorclass, errorvalue +OperationalError: (1054, "Unknown column 'LocusID' in 'field list'") + ++
+ +
Traceback (most recent call last): + File "/node_apps/www/webqtl/main.py", line 303, in ? + page = cmdCorrelation(fd) + File "/node_apps/www/cgi-bin/TextUI.py", line 433, in __init__ + self.readDB() + File "/node_apps/www/cgi-bin/TextUI.py", line 555, in readDB + self.cursor.execute(query) + File "/usr/lib/python2.3/site-packages/MySQLdb/cursors.py", line 137, in execute + self.errorhandler(self, exc, value) + File "/usr/lib/python2.3/site-packages/MySQLdb/connections.py", line 33, in defaulterrorhandler + raise errorclass, errorvalue +OperationalError: (1054, "Unknown column 'LocusID' in 'field list'") + ++
+ +
Traceback (most recent call last): + File "/node_apps/www/webqtl/main.py", line 303, in ? + page = cmdCorrelation(fd) + File "/node_apps/www/cgi-bin/TextUI.py", line 433, in __init__ + self.readDB() + File "/node_apps/www/cgi-bin/TextUI.py", line 555, in readDB + self.cursor.execute(query) + File "/usr/lib/python2.3/site-packages/MySQLdb/cursors.py", line 137, in execute + self.errorhandler(self, exc, value) + File "/usr/lib/python2.3/site-packages/MySQLdb/connections.py", line 33, in defaulterrorhandler + raise errorclass, errorvalue +OperationalError: (1054, "Unknown column 'LocusID' in 'field list'") + ++
+ +
Traceback (most recent call last): + File "/node_apps/www/webqtl/main.py", line 303, in ? + page = cmdCorrelation(fd) + File "/node_apps/www/cgi-bin/TextUI.py", line 433, in __init__ + self.readDB() + File "/node_apps/www/cgi-bin/TextUI.py", line 566, in readDB + self.cursor.execute(query) + File "/usr/lib/python2.3/site-packages/MySQLdb/cursors.py", line 137, in execute + self.errorhandler(self, exc, value) + File "/usr/lib/python2.3/site-packages/MySQLdb/connections.py", line 33, in defaulterrorhandler + raise errorclass, errorvalue +OperationalError: (1054, "Unknown column 'LocusID' in 'field list'") + ++
+ +
Traceback (most recent call last): + File "/node_apps/www/webqtl/main.py", line 303, in ? + page = cmdCorrelation(fd) + File "/node_apps/www/cgi-bin/TextUI.py", line 433, in __init__ + self.readDB() + File "/node_apps/www/cgi-bin/TextUI.py", line 555, in readDB + self.cursor.execute(query) + File "/usr/lib/python2.3/site-packages/MySQLdb/cursors.py", line 137, in execute + self.errorhandler(self, exc, value) + File "/usr/lib/python2.3/site-packages/MySQLdb/connections.py", line 33, in defaulterrorhandler + raise errorclass, errorvalue +OperationalError: (1054, "Unknown column 'LocusID' in 'field list'") + ++
+ +
Traceback (most recent call last): + File "/node_apps/www/webqtl/main.py", line 303, in ? + page = cmdCorrelation(fd) + File "/node_apps/www/cgi-bin/TextUI.py", line 433, in __init__ + self.readDB() + File "/node_apps/www/cgi-bin/TextUI.py", line 555, in readDB + self.cursor.execute(query) + File "/usr/lib/python2.3/site-packages/MySQLdb/cursors.py", line 137, in execute + self.errorhandler(self, exc, value) + File "/usr/lib/python2.3/site-packages/MySQLdb/connections.py", line 33, in defaulterrorhandler + raise errorclass, errorvalue +OperationalError: (1054, "Unknown column 'LocusID' in 'field list'") + ++
+ +
Traceback (most recent call last): + File "./cmdLine.py", line 112, in ? + page = ClusterTreePage(fd) + File "/node_apps/www/cgi-bin/correlationPage.py", line 1148, in __init__ + qtlresult = fd.genotype.regression(strains = _strains, trait = _vals) +IndexError: the length of the strain list and the value list are different, +or they are less than 8 + ++
+ +
Traceback (most recent call last): + File "./cmdLine.py", line 120, in ? + page = MultipleIntMappingPage(fd) + File "/node_apps/www/cgi-bin/intervalPage.py", line 2733, in __init__ + IntMappingPage.__init__(self,fd) + File "/node_apps/www/cgi-bin/intervalPage.py", line 228, in __init__ + LRSArray = _genotype.permutation(strains = _strains, trait = _vals, nperm=fd.nperm) +IndexError: the length of the strain list and the value list are different, +or they are less than 8 + ++
+ +
Traceback (most recent call last): + File "./cmdLine.py", line 120, in ? + page = MultipleIntMappingPage(fd) + File "/node_apps/www/cgi-bin/intervalPage.py", line 2733, in __init__ + IntMappingPage.__init__(self,fd) + File "/node_apps/www/cgi-bin/intervalPage.py", line 358, in __init__ + gifmap = self.plotIntMapping(intCanvas, _LRSResult, _bootResult, fd, offset = (75, 120, 80, 10)) + File "/node_apps/www/cgi-bin/intervalPage.py", line 2374, in plotIntMapping + additiveStep = (additiveScale[1]-additiveScale[0])/additiveScale[2] +TypeError: unsubscriptable object + ++
+ +
Traceback (most recent call last): + File "./cmdLine.py", line 120, in ? + page = MultipleIntMappingPage(fd) + File "/node_apps/www/cgi-bin/intervalPage.py", line 2733, in __init__ + IntMappingPage.__init__(self,fd) + File "/node_apps/www/cgi-bin/intervalPage.py", line 358, in __init__ + gifmap = self.plotIntMapping(intCanvas, _LRSResult, _bootResult, fd, offset = (75, 120, 80, 10)) + File "/node_apps/www/cgi-bin/intervalPage.py", line 2374, in plotIntMapping + additiveStep = (additiveScale[1]-additiveScale[0])/additiveScale[2] +TypeError: unsubscriptable object + ++
+ +
Traceback (most recent call last): + File "./cmdLine.py", line 120, in ? + page = MultipleIntMappingPage(fd) + File "/node_apps/www/cgi-bin/intervalPage.py", line 2733, in __init__ + IntMappingPage.__init__(self,fd) + File "/node_apps/www/cgi-bin/intervalPage.py", line 358, in __init__ + gifmap = self.plotIntMapping(intCanvas, _LRSResult, _bootResult, fd, offset = (75, 120, 80, 10)) + File "/node_apps/www/cgi-bin/intervalPage.py", line 2374, in plotIntMapping + additiveStep = (additiveScale[1]-additiveScale[0])/additiveScale[2] +TypeError: unsubscriptable object + ++
+ +
Traceback (most recent call last): + File "./cmdLine.py", line 120, in ? + page = MultipleIntMappingPage(fd) + File "/node_apps/www/cgi-bin/intervalPage.py", line 2733, in __init__ + IntMappingPage.__init__(self,fd) + File "/node_apps/www/cgi-bin/intervalPage.py", line 358, in __init__ + gifmap = self.plotIntMapping(intCanvas, _LRSResult, _bootResult, fd, offset = (75, 120, 80, 10)) + File "/node_apps/www/cgi-bin/intervalPage.py", line 2374, in plotIntMapping + additiveStep = (additiveScale[1]-additiveScale[0])/additiveScale[2] +TypeError: unsubscriptable object + ++
+ +
Traceback (most recent call last): + File "./cmdLine.py", line 120, in ? + page = MultipleIntMappingPage(fd) + File "/node_apps/www/cgi-bin/intervalPage.py", line 2733, in __init__ + IntMappingPage.__init__(self,fd) + File "/node_apps/www/cgi-bin/intervalPage.py", line 358, in __init__ + gifmap = self.plotIntMapping(intCanvas, _LRSResult, _bootResult, fd, offset = (75, 120, 80, 10)) + File "/node_apps/www/cgi-bin/intervalPage.py", line 2374, in plotIntMapping + additiveStep = (additiveScale[1]-additiveScale[0])/additiveScale[2] +TypeError: unsubscriptable object + ++
+ +
Traceback (most recent call last): + File "/node_apps/www/webqtl/main.py", line 136, in ? + page = editHtmlPage(fd) + File "/node_apps/www/cgi-bin/upddataPage.py", line 1060, in __init__ + fp = open(fileName, 'wb') +IOError: [Errno 13] Permission denied: '/node_apps/www/html/webqtl//dbdoc/HC_M2_1005_P.html' + ++
+ +
Traceback (most recent call last): + File "/home/hqli/public_html/cgi-bin/beta/main.py", line 162, in ? + page = SearchResultPage(fd) + File "/home/hqli/public_html/cgi-bin/beta/searchPage.py", line 56, in __init__ + indId, indName, indFullName, indConfid = self.cursor.fetchall()[0] +IndexError: tuple index out of range + ++
+ +
Traceback (most recent call last): + File "/node_apps/www/webqtl/main.py", line 162, in ? + page = SearchResultPage(fd) + File "/node_apps/www/cgi-bin/searchPage.py", line 56, in __init__ + indId, indName, indFullName, indConfid = self.cursor.fetchall()[0] +IndexError: tuple index out of range + ++
+ +
Traceback (most recent call last): + File "/home/hqli/public_html/cgi-bin/beta/main.py", line 162, in ? + page = SearchResultPage(fd) + File "/home/hqli/public_html/cgi-bin/beta/searchPage.py", line 56, in __init__ + indId, indName, indFullName, indConfid = self.cursor.fetchall()[0] +IndexError: tuple index out of range + ++
+ +
Traceback (most recent call last): + File "/home/hqli/public_html/cgi-bin/beta/main.py", line 162, in ? + page = SearchResultPage(fd) + File "/home/hqli/public_html/cgi-bin/beta/searchPage.py", line 56, in __init__ + indId, indName, indFullName, indConfid = self.cursor.fetchall()[0] +IndexError: tuple index out of range + ++
+ +
Traceback (most recent call last): + File "/home/hqli/public_html/cgi-bin/beta/main.py", line 162, in ? + page = SearchResultPage(fd) + File "/home/hqli/public_html/cgi-bin/beta/searchPage.py", line 56, in __init__ + indId, indName, indFullName, indConfid = self.cursor.fetchall()[0] +IndexError: tuple index out of range + ++
+ +
Traceback (most recent call last): + File "/home/hqli/public_html/cgi-bin/beta/main.py", line 162, in ? + page = SearchResultPage(fd) + File "/home/hqli/public_html/cgi-bin/beta/searchPage.py", line 56, in __init__ + indId, indName, indFullName, indConfid = self.cursor.fetchall()[0] +IndexError: tuple index out of range + ++
+ +
Traceback (most recent call last): + File "/home/hqli/public_html/cgi-bin/beta/main.py", line 162, in ? + page = SearchResultPage(fd) + File "/home/hqli/public_html/cgi-bin/beta/searchPage.py", line 57, in __init__ + indId, indName, indFullName, indConfid = self.cursor.fetchall()[0] +IndexError: tuple index out of range + ++
+ +
Traceback (most recent call last): + File "/home/hqli/public_html/cgi-bin/beta/main.py", line 162, in ? + page = SearchResultPage(fd) + File "/home/hqli/public_html/cgi-bin/beta/searchPage.py", line 57, in __init__ + indId, indName, indFullName, indConfid = self.cursor.fetchall()[0] +IndexError: tuple index out of range + ++
+ +
Traceback (most recent call last): + File "/node_apps/www/webqtl/main.py", line 162, in ? + page = SearchResultPage(fd) + File "/node_apps/www/cgi-bin/searchPage.py", line 56, in __init__ + indId, indName, indFullName, indConfid = self.cursor.fetchall()[0] +IndexError: tuple index out of range + ++
+ +
Traceback (most recent call last):
+ File "./cmdLine.py", line 120, in ?
+ page = MultipleIntMappingPage(fd)
+ File "/node_apps/www/cgi-bin/intervalPage.py", line 2733, in __init__
+ IntMappingPage.__init__(self,fd)
+ File "/node_apps/www/cgi-bin/intervalPage.py", line 519, in __init__
+ mainAreas = self.plotIntMappingALEX_TEST(intCanvas, _LRSResult, _bootResult, fd, geneTable=geneTableMain, offset= (self.WIDTH_LEFT_OFFSET_DEFAULT, self.WIDTH_RIGHT_OFFSET_DEFAULT, self.HEIGHT_TOP_OFFSET_DEFAULT, self.HEIGHT_BOTTOM_OFFSET_DEFAULT), zoom = 1)
+ File "/node_apps/www/cgi-bin/intervalPage.py", line 1786, in plotIntMappingALEX_TEST
+ geneCol.loadGenesOnChr(chrName, self.cursor, self.diffCol, self.startMb, self.endMb, fd.identification)
+ File "/node_apps/www/cgi-bin/GeneCollection.py", line 88, in loadGenesOnChr
+ cursor.execute("SELECT count(id) FROM SNP_perlegen where mb > %f and mb < %f and chr = '%s' and %s=1" % (gene[4]-0.002, gene[5]+0.002, tempChr, diffCol))
+ File "/usr/lib/python2.3/site-packages/MySQLdb/cursors.py", line 137, in execute
+ self.errorhandler(self, exc, value)
+ File "/usr/lib/python2.3/site-packages/MySQLdb/connections.py", line 33, in defaulterrorhandler
+ raise errorclass, errorvalue
+ProgrammingError: (1146, "Table 'db_webqtl.SNP_perlegen' doesn't exist")
+
+
++ +
Traceback (most recent call last):
+ File "./cmdLine.py", line 120, in ?
+ page = MultipleIntMappingPage(fd)
+ File "/node_apps/www/cgi-bin/intervalPage.py", line 2733, in __init__
+ IntMappingPage.__init__(self,fd)
+ File "/node_apps/www/cgi-bin/intervalPage.py", line 519, in __init__
+ mainAreas = self.plotIntMappingALEX_TEST(intCanvas, _LRSResult, _bootResult, fd, geneTable=geneTableMain, offset= (self.WIDTH_LEFT_OFFSET_DEFAULT, self.WIDTH_RIGHT_OFFSET_DEFAULT, self.HEIGHT_TOP_OFFSET_DEFAULT, self.HEIGHT_BOTTOM_OFFSET_DEFAULT), zoom = 1)
+ File "/node_apps/www/cgi-bin/intervalPage.py", line 1786, in plotIntMappingALEX_TEST
+ geneCol.loadGenesOnChr(chrName, self.cursor, self.diffCol, self.startMb, self.endMb, fd.identification)
+ File "/node_apps/www/cgi-bin/GeneCollection.py", line 88, in loadGenesOnChr
+ cursor.execute("SELECT count(id) FROM SNP_perlegen where mb > %f and mb < %f and chr = '%s' and %s=1" % (gene[4]-0.002, gene[5]+0.002, tempChr, diffCol))
+ File "/usr/lib/python2.3/site-packages/MySQLdb/cursors.py", line 137, in execute
+ self.errorhandler(self, exc, value)
+ File "/usr/lib/python2.3/site-packages/MySQLdb/connections.py", line 33, in defaulterrorhandler
+ raise errorclass, errorvalue
+ProgrammingError: (1146, "Table 'db_webqtl.SNP_perlegen' doesn't exist")
+
+
++ +
Traceback (most recent call last):
+ File "./cmdLine.py", line 120, in ?
+ page = MultipleIntMappingPage(fd)
+ File "/node_apps/www/cgi-bin/intervalPage.py", line 2733, in __init__
+ IntMappingPage.__init__(self,fd)
+ File "/node_apps/www/cgi-bin/intervalPage.py", line 519, in __init__
+ mainAreas = self.plotIntMappingALEX_TEST(intCanvas, _LRSResult, _bootResult, fd, geneTable=geneTableMain, offset= (self.WIDTH_LEFT_OFFSET_DEFAULT, self.WIDTH_RIGHT_OFFSET_DEFAULT, self.HEIGHT_TOP_OFFSET_DEFAULT, self.HEIGHT_BOTTOM_OFFSET_DEFAULT), zoom = 1)
+ File "/node_apps/www/cgi-bin/intervalPage.py", line 1786, in plotIntMappingALEX_TEST
+ geneCol.loadGenesOnChr(chrName, self.cursor, self.diffCol, self.startMb, self.endMb, fd.identification)
+ File "/node_apps/www/cgi-bin/GeneCollection.py", line 88, in loadGenesOnChr
+ cursor.execute("SELECT count(id) FROM SNP_perlegen where mb > %f and mb < %f and chr = '%s' and %s=1" % (gene[4]-0.002, gene[5]+0.002, tempChr, diffCol))
+ File "/usr/lib/python2.3/site-packages/MySQLdb/cursors.py", line 137, in execute
+ self.errorhandler(self, exc, value)
+ File "/usr/lib/python2.3/site-packages/MySQLdb/connections.py", line 33, in defaulterrorhandler
+ raise errorclass, errorvalue
+ProgrammingError: (1146, "Table 'db_webqtl.SNP_perlegen' doesn't exist")
+
+
++ + -- cgit 1.4.1