From 204a308be0f741726b9a620d88fbc22b22124c81 Mon Sep 17 00:00:00 2001 From: Arun Isaac Date: Fri, 29 Dec 2023 18:55:37 +0000 Subject: Namespace all modules under gn2. We move all modules under a gn2 directory. This is important for "correct" packaging and deployment as a Guix service. --- gn2/wqflask/templates/show_trait_details.html | 255 ++++++++++++++++++++++++++ 1 file changed, 255 insertions(+) create mode 100644 gn2/wqflask/templates/show_trait_details.html (limited to 'gn2/wqflask/templates/show_trait_details.html') diff --git a/gn2/wqflask/templates/show_trait_details.html b/gn2/wqflask/templates/show_trait_details.html new file mode 100644 index 00000000..9c12393d --- /dev/null +++ b/gn2/wqflask/templates/show_trait_details.html @@ -0,0 +1,255 @@ +
| Group | +{{ this_trait.dataset.group.species[0]|upper }}{{ this_trait.dataset.group.species[1:] }}: {{ this_trait.dataset.group.name }} group | +
| Phenotype | +{{ this_trait.description_fmt }} |
+
| Authors | +{{ this_trait.authors }} |
+
| Title | +{{ this_trait.title }} |
+
| Journal | +{{ this_trait.journal }} ({% if this_trait.pubmed_id %}{{ this_trait.year }}{% else %}{{ this_trait.year }}{% endif %}) | +
| Tissue | +{{ this_trait.dataset.tissue }} | +
| Gene Symbol | +{{ this_trait.symbol }} | +
| Aliases | +Wikidata: {{ this_trait.wikidata_alias_fmt|replace(",",";") }} | +
| + | GeneNetwork: {{ this_trait.alias_fmt|replace(",",";") }} | +
| Location | +{{ this_trait.location_fmt }} | +
| Summary | +{{ ncbi_summary }} | +
| Database | +
+
+ {{ dataset.fullname }}
+
+ + + GN2 Link: {{ dataset.fullname }} + + |
+
| Target Score | ++ + BLAT Specificity + : + {{ "%0.3f" | format(this_trait.probe_set_specificity|float) }} + + {% if this_trait.probe_set_blat_score %} + Score: {{ "%0.3f" | format(this_trait.probe_set_blat_score|float) }} + {% endif %} + | +
| Resource Links | +
+ {% if pubmed_link %}
+
+ PubMed
+
+ {% endif %}
+ {% if ncbi_gene_link %}
+
+ Gene
+
+
+ {% endif %}
+ {% if omim_link %}
+
+ OMIM
+
+
+ {% endif %}
+ {% if genemania_link %}
+
+ GeneMANIA
+
+
+ {% endif %}
+ {% if protein_atlas_link %}
+
+ Protein Atlas
+
+
+ {% endif %}
+ {% if open_targets_link %}
+
+ Open Targets
+
+
+ {% endif %}
+ {% if homologene_link %}
+
+ HomoloGene
+
+
+ {% endif %}
+ {% if this_trait.symbol %}
+
+ {% if rgd_link %}
+
+ Rat Genome DB
+
+
+ {% endif %}
+
+ GTEx Portal
+
+
+ {% if phenogen_link %}
+
+ PhenoGen
+
+
+ {% endif %}
+ {% if genebridge_link %}
+
+ GeneBridge
+
+ {% endif %}
+ {% endif %}
+ + {% if ucsc_blat_link %} + + UCSC + + + {% endif %} + {% if biogps_link %} + + BioGPS + + + {% endif %} + {% if string_link %} + + STRING + + + {% endif %} + {% if panther_link %} + + PANTHER + + + {% endif %} + {% if gemma_link %} + + Gemma + + + {% endif %} + {% if aba_link %} + + ABA + + + {% endif %} + {% if ebi_gwas_link %} + + EBI GWAS + + + {% endif %} + {% if wiki_pi_link %} + + Wiki-Pi + + + {% endif %} + {% if uniprot_link %} + + UniProt + + + {% endif %} + |
+