From 204a308be0f741726b9a620d88fbc22b22124c81 Mon Sep 17 00:00:00 2001
From: Arun Isaac
Date: Fri, 29 Dec 2023 18:55:37 +0000
Subject: Namespace all modules under gn2.

We move all modules under a gn2 directory. This is important for
"correct" packaging and deployment as a Guix service.
---
 gn2/wqflask/templates/gn3_ctl_results.html | 101 +++++++++++++++++++++++++++++
 1 file changed, 101 insertions(+)
 create mode 100644 gn2/wqflask/templates/gn3_ctl_results.html

(limited to 'gn2/wqflask/templates/gn3_ctl_results.html')

diff --git a/gn2/wqflask/templates/gn3_ctl_results.html b/gn2/wqflask/templates/gn3_ctl_results.html
new file mode 100644
index 00000000..c42707f6
--- /dev/null
+++ b/gn2/wqflask/templates/gn3_ctl_results.html
@@ -0,0 +1,101 @@
+{% extends "base.html" %}
+{% block title %}Ctl results{% endblock %}
+{% block content %}
+<link rel="stylesheet" href="https://maxcdn.bootstrapcdn.com/bootstrap/4.0.0/css/bootstrap.min.css" integrity="sha384-Gn5384xqQ1aoWXA+058RXPxPg6fy4IWvTNh0E263XmFcJlSAwiGgFAW/dAiS6JXm" crossorigin="anonymous">
+<link REL="stylesheet" TYPE="text/css" href="{{ url_for('css', filename='bootstrap/css/bootstrap.css') }}" />
+<link rel="stylesheet" href="https://cdn.datatables.net/1.11.3/css/jquery.dataTables.min.css">
+<style type="text/css">
+.carousel-control-next,
+.carousel-control-prev
+
+/*, .carousel-indicators */
+    {
+    filter: invert(100%);
+}
+</style>
+<div style="margin-top:10px">
+
+{% if error %}
+    <div>
+        <h4 style="text-align:center;color:red">{{error}}</h4>
+    </div> 
+
+{% else %}
+    <div>
+    <div>
+        <div style="text-align: center;">
+            <h3>CTL/QTL Plots for Individual Traits</h3>
+            <h4> {{ctl_plots|length}} phenotypes as input</h4>
+        </div>
+        <div id="carouselExampleControls" class="carousel slide" data-interval="false">
+            <div class="carousel-inner">
+                {% for ctl_plot in ctl_plots %}
+                <div class="item{% if loop.index == 1 %} active{% endif %}">
+                    <img style="width:1000px;height: 600px;" class="center-block" src="data:image/jpeg;base64,{{ ctl_plot | safe }}" alt="First slide">
+                </div>
+                {% endfor %}
+                <a class="carousel-control-prev" href="#carouselExampleControls" role="button" data-slide="prev">
+                    <span class="carousel-control-prev-icon" aria-hidden="true"></span>
+                    <span class="sr-only">Previous</span>
+                </a>
+                <a class="carousel-control-next" href="#carouselExampleControls" role="button" data-slide="next">
+                    <span class="carousel-control-next-icon" aria-hidden="true"></span>
+                    <span class="sr-only">Next</span>
+                </a>
+            </div>
+        </div>
+    </div>
+    <div>
+        <div style="text-align:center;">
+            <h2>Ctl line plot</h2>
+            <h4>Plot the CTL for genome-wide CTL on all traits (the output of CTLscan).</h4>
+        </div>
+        <div class="row">
+            <div class="col-8">
+                <img style="width:100%;height: 600px;" class="center-block" src="data:image/jpeg;base64,{{ image_data | safe }}">
+            </div>
+            <div class="col-4">
+                <ol style="height: 100%;display:flex;flex-direction: column;align-items: center;justify-content: center;">
+                    {% for trait in phenotypes %}
+                    {% set trait_data = trait.split(':') %}
+                    <li><a href="/show_trait?trait_id={{trait_data[0]}}&dataset={{trait_data[1]}}">{{trait_data[0]}}</a></li>
+                    {% endfor %}
+                </ol>
+            </div>
+        </div>
+    </div>
+    <h2 style="text-align:center">Significant CTL </h2>
+    <table id="significance" width="80vw"></table>
+    <div style="text-align: center;margin-top: 20px;">
+        <h3 style="text-align:center;">Network figure</h3>
+        <div style="margin-top: 20px;">
+            <p>Use tools like cytoscape to visualize the network</p>
+            <a href="/ctl_network_files/{{network_file_name}}/sif" class="btn btn-secondary btn-lg mx-2">Download Sif file</a>
+            <a href="/ctl_network_files/{{network_file_name}}/nodes" class="btn btn-secondary btn-lg mx-2">Download Node file</a>
+        </div>
+    </div>
+</div>
+
+{% endif %}
+</div>
+
+<!-- <script src="https://maxcdn.bootstrapcdn.com/bootstrap/4.0.0/js/bootstrap.min.js" integrity="sha384-JZR6Spejh4U02d8jOt6vLEHfe/JQGiRRSQQxSfFWpi1MquVdAyjUar5+76PVCmYl" crossorigin="anonymous"></script> -->
+<script src="{{ url_for('js', filename='bootstrap/js/bootstrap.min.js') }}" type="text/javascript"></script>
+<script language="javascript" type="text/javascript" src="{{ url_for('js', filename='DataTables/js/jquery.js') }}"></script>
+<script language="javascript" type="text/javascript" src="{{ url_for('js', filename='DataTables/js/jquery.dataTables.min.js') }}"></script>
+<script language="javascript" type="text/javascript" src="{{ url_for('js', filename='DataTablesExtensions/scroller/js/dataTables.scroller.min.js') }}"></script>
+<script type="text/javascript">
+let { data_set_rows, col_names } = {{ significance_data | safe }}
+
+
+$('#significance').DataTable({
+    data: data_set_rows,
+    columns: col_names.map((name) => {
+        return {
+            title: name
+        }
+    })
+});
+</script>
+{% endblock %}
+
-- 
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