From bdcfb440fd9fd8d0fa2c70e3fe1bd0a1bc9d01e2 Mon Sep 17 00:00:00 2001 From: Frederick Muriuki Muriithi Date: Fri, 6 Oct 2023 11:31:18 +0300 Subject: Provide default `CORRELATION_COMMAND` setting. Remove unused import. --- etc/default_settings.py | 1 + 1 file changed, 1 insertion(+) (limited to 'etc') diff --git a/etc/default_settings.py b/etc/default_settings.py index 0ffe6ae9..b7d41bca 100644 --- a/etc/default_settings.py +++ b/etc/default_settings.py @@ -112,6 +112,7 @@ JS_GN_PATH = os.environ['HOME'] + "/genenetwork/javascript" # PLINK_COMMAND = str.strip(os.popen("which plink2").read()) # GEMMA_COMMAND = str.strip(os.popen("which gemma").read()) REAPER_COMMAND = os.environ['GN2_PROFILE'] + "/bin/qtlreaper" +CORRELATION_COMMAND = os.environ["GN2_PROFILE"] + "/bin/correlation_rust" # GEMMA_WRAPPER_COMMAND = str.strip(os.popen("which gemma-wrapper").read()) OAUTH2_CLIENT_ID="0bbfca82-d73f-4bd4-a140-5ae7abb4a64d" -- cgit 1.4.1