From 575e00b1061c58952cba38af5ab078ca0081b4d7 Mon Sep 17 00:00:00 2001 From: Pjotr Prins Date: Wed, 24 Feb 2016 16:34:52 +0000 Subject: [PATCH 041/100] Fixes for running tools --- etc/default_settings.py | 6 +++--- 1 file changed, 3 insertions(+), 3 deletions(-) (limited to 'etc') diff --git a/etc/default_settings.py b/etc/default_settings.py index 6a218f26..60a3a7b4 100644 --- a/etc/default_settings.py +++ b/etc/default_settings.py @@ -24,6 +24,6 @@ SECRET_HMAC_CODE = '\x08\xdf\xfa\x93N\x80\xd9\\H@\\\x9f`\x98d^\xb4a;\xc6OM\x946a # Path overrides for Genenetwork GENENETWORK_FILES = "../../gn2_data" -PYLMM_COMMAND = os.popen("which pylmm_redis").read() -PLINK_COMMAND = os.popen("which plink2").read() -GEMMA_COMMAND = os.popen("which gemma").read() +PYLMM_COMMAND = str.strip(os.popen("which pylmm_redis").read()) +PLINK_COMMAND = str.strip(os.popen("which plink2").read()) +GEMMA_COMMAND = str.strip(os.popen("which gemma").read()) -- cgit v1.2.3