From 3181bd6261b09a5e9b027256057c21c49792bd32 Mon Sep 17 00:00:00 2001
From: jgart
Date: Fri, 10 Sep 2021 00:29:28 -0400
Subject: Remove unnecessary git pull commands from installation instructions

---
 doc/README.org | 2 --
 1 file changed, 2 deletions(-)

(limited to 'doc/README.org')

diff --git a/doc/README.org b/doc/README.org
index 1236016e..8839aefc 100644
--- a/doc/README.org
+++ b/doc/README.org
@@ -81,14 +81,12 @@ GeneNetwork2 with
 : source ~/opt/guix-pull/etc/profile
 : git clone https://git.genenetwork.org/guix-bioinformatics/guix-bioinformatics.git ~/guix-bioinformatics
 : cd ~/guix-bioinformatics
-: git pull
 : env GUIX_PACKAGE_PATH=$HOME/guix-bioinformatics guix package -i genenetwork2 -p ~/opt/genenetwork2
 
 you probably also need guix-past (the upstream channel for older packages):
 
 : git clone https://gitlab.inria.fr/guix-hpc/guix-past.git ~/guix-past
 : cd ~/guix-past
-: git pull
 : env GUIX_PACKAGE_PATH=$HOME/guix-bioinformatics:$HOME/guix-past/modules ~/opt/guix-pull/bin/guix package -i genenetwork2 -p ~/opt/genenetwork2
 
 ignore the warnings. Guix should install the software without trying
-- 
cgit v1.2.3


From 83719648e505747f16281d7e8e14f1003297be5c Mon Sep 17 00:00:00 2001
From: BonfaceKilz
Date: Wed, 17 Nov 2021 13:42:26 +0300
Subject: README.org: Replace broken link with environments page

---
 doc/README.org | 2 +-
 1 file changed, 1 insertion(+), 1 deletion(-)

(limited to 'doc/README.org')

diff --git a/doc/README.org b/doc/README.org
index 8839aefc..e1c6b614 100644
--- a/doc/README.org
+++ b/doc/README.org
@@ -26,7 +26,7 @@
 
 * Introduction
 
-Large system deployments can get very [[http://biogems.info/contrib/genenetwork/gn2.svg ][complex]]. In this document we
+Large system deployments can get very [[http://genenetwork.org/environments/][complex]]. In this document we
 explain the GeneNetwork version 2 (GN2) reproducible deployment system
 which is based on GNU Guix (see also [[https://github.com/pjotrp/guix-notes/blob/master/README.md][Guix-notes]]). The Guix
 system can be used to install GN with all its files and dependencies.
-- 
cgit v1.2.3