From 96e4efe928773b292f3d3b9b7ef3c23e5ec003fc Mon Sep 17 00:00:00 2001 From: Pjotr Prins Date: Mon, 18 Feb 2019 11:28:41 +0000 Subject: Note on running tests --- README.md | 11 ++++++++++- 1 file changed, 10 insertions(+), 1 deletion(-) (limited to 'README.md') diff --git a/README.md b/README.md index 59645994..c9582d0f 100644 --- a/README.md +++ b/README.md @@ -27,9 +27,18 @@ genenetwork2 (default is http://localhost:5003/). For full examples (you'll need to set a number of environment variables), including running scripts and -a Python REPL, see the startup script +a Python REPL, for example + +```sh +env GN2_PROFILE=~/opt/gn-latest GENENETWORK_FILES=~/data/gn2_data ./bin/genenetrk2 +``` + +see the startup script [./bin/genenetwork2](https://github.com/genenetwork/genenetwork2/blob/testing/bin/genenetwork2). +Also Mysql and Elasticsearch need to be running, see +[INSTALL](./doc/README.org). + ## Testing We are building 'Mechanical Rob' automated testing using Python -- cgit v1.2.3