From 300f0defa19f20b294bfde2931fb9eaa77d918fd Mon Sep 17 00:00:00 2001
From: pjotrp
Date: Tue, 12 May 2015 11:56:52 -0500
Subject: Added pylmm instruction

---
 INSTALL.md | 12 ++++++++++++
 1 file changed, 12 insertions(+)

(limited to 'INSTALL.md')

diff --git a/INSTALL.md b/INSTALL.md
index 9f28ac28..5711dda4 100644
--- a/INSTALL.md
+++ b/INSTALL.md
@@ -72,6 +72,18 @@ or
 $python ./secure_server.py
 ```
 
+## Running tools
+
+### pylmm
+
+To run pylmm check out the repository at https://github.com/genenetwork/pylmm_gn2.
+
+Next update the setting.py file to point at the tree
+
+GN2 can locate PYLMM through PYLMM_PATH in setting.py (or in ENV)
+
+    PYLMM_PATH = '/home/test/opensource/python/pylmm_gn2/pylmm_gn2'
+
 ## Other information
 
 Check also the ./misc/ directory for settings
\ No newline at end of file
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