From f3eb7f6403c2f0e48279ee02b0cd259b16775c94 Mon Sep 17 00:00:00 2001
From: Zachary Sloan
Date: Thu, 20 Dec 2012 16:50:29 -0600
Subject: Made composite mapping options show/hide for the interval mapping
 section

---
 .../new/javascript/show_trait_mapping_tools.coffee | 10 +++-
 .../new/javascript/show_trait_mapping_tools.js     |  8 ++-
 .../templates/show_trait_mapping_tools.html        | 64 +++++++++++-----------
 3 files changed, 48 insertions(+), 34 deletions(-)

diff --git a/wqflask/wqflask/static/new/javascript/show_trait_mapping_tools.coffee b/wqflask/wqflask/static/new/javascript/show_trait_mapping_tools.coffee
index cd6dc1d8..03048c5d 100644
--- a/wqflask/wqflask/static/new/javascript/show_trait_mapping_tools.coffee
+++ b/wqflask/wqflask/static/new/javascript/show_trait_mapping_tools.coffee
@@ -4,5 +4,13 @@ $ ->
         url = "/marker_regression"
         $("#trait_data_form").attr("action", url);
         $("#trait_data_form").submit()
+        
+    $("#marker_regression_btn").click(run_marker_regression)
+        
+        
+        
+        
+    composite_mapping_fields = ->
+        $(".composite_fields").toggle()
     
-    $("#marker_regression_btn").click(run_marker_regression)
\ No newline at end of file
+    $("#use_composite_choice").change(composite_mapping_fields)
\ No newline at end of file
diff --git a/wqflask/wqflask/static/new/javascript/show_trait_mapping_tools.js b/wqflask/wqflask/static/new/javascript/show_trait_mapping_tools.js
index cca396a9..20e379df 100644
--- a/wqflask/wqflask/static/new/javascript/show_trait_mapping_tools.js
+++ b/wqflask/wqflask/static/new/javascript/show_trait_mapping_tools.js
@@ -2,7 +2,7 @@
 (function() {
 
   $(function() {
-    var run_marker_regression;
+    var composite_mapping_fields, run_marker_regression;
     run_marker_regression = function() {
       var url;
       console.log("In marker regression");
@@ -10,7 +10,11 @@
       $("#trait_data_form").attr("action", url);
       return $("#trait_data_form").submit();
     };
-    return $("#marker_regression_btn").click(run_marker_regression);
+    $("#marker_regression_btn").click(run_marker_regression);
+    composite_mapping_fields = function() {
+      return $(".composite_fields").toggle();
+    };
+    return $("#use_composite_choice").change(composite_mapping_fields);
   });
 
 }).call(this);
diff --git a/wqflask/wqflask/templates/show_trait_mapping_tools.html b/wqflask/wqflask/templates/show_trait_mapping_tools.html
index b6215fca..1119d619 100644
--- a/wqflask/wqflask/templates/show_trait_mapping_tools.html
+++ b/wqflask/wqflask/templates/show_trait_mapping_tools.html
@@ -59,39 +59,41 @@
                     </div>
                     {% endif %}
 
-                    <div class="well well-small">
-                        <div class="control-group">
-                            <label class="control-label"><b>Composite Mapping</b></label>
-                            <div class="controls">                      
-                                <label class="radio inline">
-                                    <input type="radio" name="scale" id="scale" value="megabase">
-                                    Yes
-                                </label>
-                                <label class="radio inline">
-                                    <input type="radio" name="scale" id="scale" value="centimorgan" checked>
-                                    No
-                                </label>
-                            </div>
+                    <div class="control-group">
+                        <label class="control-label"><b>Composite Mapping</b></label>
+                        <div class="controls" id="use_composite_choice">                      
+                            <label class="radio inline">
+                                <input type="radio" name="use_composite"
+                                       id="use_composite" value="yes">
+                                Yes
+                            </label>
+                            <label class="radio inline">
+                                <input type="radio" name="use_composite"
+                                       id="use_composite" value="no" checked>
+                                No
+                            </label>
                         </div>
-                        <div class="control-group">
-                            <label class="control-label">Choose Closest Control</label>
-                            <div class="controls">                      
-                                <label class="radio inline">
-                                    <input type="radio" name="scale" id="scale" value="megabase">
-                                    Yes
-                                </label>
-                                <label class="radio inline">
-                                    <input type="radio" name="scale" id="scale" value="centimorgan" checked>
-                                    No
-                                </label>
-                            </div>
+                    </div>
+                    <div class="control-group composite_fields" style="display: none;">
+                        <label class="control-label">Choose Closest Control</label>
+                        <div class="controls">                      
+                            <label class="radio inline">
+                                <input type="radio" name="default_control_locus"
+                                       id="default_control_locus" value="yes">
+                                Yes
+                            </label>
+                            <label class="radio inline">
+                                <input type="radio" name="default_control_locus"
+                                       id="default_control_locus" value="no" checked>
+                                No
+                            </label>
                         </div>
-                        <div class="control-group">
-                            <label for="mapping_bootstraps" class="control-label"
-                                   title="Bootstrapping Resamples">Control Locus</label>
-                            <div class="controls">
-                                <input name="mapping_bootstraps" value="2000" type="text" />
-                            </div>
+                    </div>
+                    <div class="control-group composite_fields" style="display: none;">
+                        <label for="mapping_bootstraps" class="control-label"
+                               title="Bootstrapping Resamples">Control Locus</label>
+                        <div class="controls">
+                            <input name="mapping_bootstraps" value="2000" type="text" />
                         </div>
                     </div>
                          
-- 
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