From c0fbbb42a79baa823b517ee8f537cec1edc057c8 Mon Sep 17 00:00:00 2001
From: zsloan
Date: Tue, 14 Sep 2021 18:09:36 +0000
Subject: Replace / with _ in the file hashes in rqtl_mapping.py, since they
 get translated to directories

---
 wqflask/wqflask/marker_regression/rqtl_mapping.py | 1 +
 1 file changed, 1 insertion(+)

diff --git a/wqflask/wqflask/marker_regression/rqtl_mapping.py b/wqflask/wqflask/marker_regression/rqtl_mapping.py
index cd578870..a148b49c 100644
--- a/wqflask/wqflask/marker_regression/rqtl_mapping.py
+++ b/wqflask/wqflask/marker_regression/rqtl_mapping.py
@@ -61,6 +61,7 @@ def get_hash_of_textio(the_file: TextIO) -> str:
 
     the_file.seek(0)
     hash_of_file = hashlib.md5(the_file.read().encode()).hexdigest()
+    hash_of_file = hash_of_file.replace("/", "_") # Replace / with _ to prevent issue with filenames being translated to directories
 
     return hash_of_file
 
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