From bbf79eeec5dfc23dfe4583af61b8ebe4ce97aa6f Mon Sep 17 00:00:00 2001
From: Munyoki Kilyungi
Date: Tue, 27 Aug 2024 10:03:25 +0300
Subject: Rename generif -> genewiki.

Signed-off-by: Munyoki Kilyungi <me@bonfacemunyoki.com>
---
 gn2/wqflask/templates/generif.html  | 101 ------------------------------------
 gn2/wqflask/templates/genewiki.html | 101 ++++++++++++++++++++++++++++++++++++
 gn2/wqflask/views.py                |   4 +-
 3 files changed, 103 insertions(+), 103 deletions(-)
 delete mode 100644 gn2/wqflask/templates/generif.html
 create mode 100644 gn2/wqflask/templates/genewiki.html

diff --git a/gn2/wqflask/templates/generif.html b/gn2/wqflask/templates/generif.html
deleted file mode 100644
index ac815b43..00000000
--- a/gn2/wqflask/templates/generif.html
+++ /dev/null
@@ -1,101 +0,0 @@
-{% extends "base.html" %}
-
-{% block title %}
-GeneWiki Entry for {{ symbol }}
-{% endblock %}
-
-{% block css %}
-<style>
-
- .badge {
-     vertical-align: top;
-     background-color: #336699;
- }
-
- .list-group {
-     counter-reset: gnentries;
- }
-
- summary::before {
-     counter-increment: gnentries;
-     content: counter(gnentries) "." " ";
- }
-
- summary:hover {
-     cursor: zoom-in;
- }
-</style>
-
-{% endblock %}
-{% block content %}
-
-
-<div class="container">
-    <h1 class="page-header">GeneWiki For {{ symbol }}</h1>
-    <p class="well"><strong>GeneWiki</strong> enables you to enrich the annotation of genes and transcripts.</p>
-
-    <h3>
-	<strong>GeneNetwork</strong>
-	<span class="badge">
-	    {{ entries.gn_entries|length if entries.gn_entries[0] else 0 }}
-	</span>:
-    </h3>
-    {% if entries.gn_entries[0] %}
-    <ul class="list-group">
-	{% for entry in entries.gn_entries %}
-	<li class="list-group-item">
-	    <details>
-		<summary>
-		    {{ entry["entry"]["value"] }}
-		    {% if entry.get("weburl") %}
-		    <sup><small><a href="{{ entry.weburl.value }}" target="_blank"><span class="glyphicon glyphicon-globe" aria-hidden="true"></span> web</a></small></sup>
-		    {% endif %}
-		</summary>
-		<dl class="dl-horizontal">
-		    <dt>Author:</dt>
-		    <dd>{{ entry["author"]["value"] }}</dd>
-
-		    {% if entry.get("geneCategory") %}
-		    <dt>Category:</dt>
-		    <dd>{{ entry["geneCategory"]["value"]}}</dd>
-		    {% endif %}
-
-		    <dt>Add Time:</dt>
-		    <dd>{{ entry["created"]["value"]}}</dd>
-		</dl>
-	    </details>
-	</li>
-	{% endfor %}
-    </ul>
-
-    {% else %}
-
-    <p class="well"><u>There are no GeneNetwork entries for <b>{{ symbol }}.</b></u></p>
-
-    {% endif %}
-
-    <h3>
-	<strong>GeneRIF from NCBI</strong>
-	<span class="badge">
-	    {{ entries.ncbi_entries|length if entries.ncbi_entries[0] else 0 }}
-	</span>:
-    </h3>
-    {% if entries.ncbi_entries[0] %}
-	<ol>
-	{% for entry in entries.ncbi_entries %}
-	<li>
-	    {{ entry.entry.value }}
-	    (<a href="{{ entry['generif']['value'] }}" target="_blank">{{ entry["speciesBinomialName"]["value"] }}</a>)
-            {% if entry.PubMedId.value != "" %}
-	    {% set pmids = entry.PubMedId.value.split(",") %}
-	    (PubMed: {% for id in pmids %} <a href="http://rdf.ncbi.nlm.nih.gov/pubmed/{{ id }}" target="_blank">{{ id }}</a>{% endfor %})
-	    <sup><small><em>{{ entry.createdOn.value }}</em></small></sup>
-	    {% endif %}
-	</li>
-	{% endfor %}
-    </ol>
-    {% else %}
-    <p class="well"><u>There are no NCBI entries for <b>{{ symbol }}.</b></u></p>
-    {% endif %}
-</div>
-{% endblock %}
diff --git a/gn2/wqflask/templates/genewiki.html b/gn2/wqflask/templates/genewiki.html
new file mode 100644
index 00000000..ac815b43
--- /dev/null
+++ b/gn2/wqflask/templates/genewiki.html
@@ -0,0 +1,101 @@
+{% extends "base.html" %}
+
+{% block title %}
+GeneWiki Entry for {{ symbol }}
+{% endblock %}
+
+{% block css %}
+<style>
+
+ .badge {
+     vertical-align: top;
+     background-color: #336699;
+ }
+
+ .list-group {
+     counter-reset: gnentries;
+ }
+
+ summary::before {
+     counter-increment: gnentries;
+     content: counter(gnentries) "." " ";
+ }
+
+ summary:hover {
+     cursor: zoom-in;
+ }
+</style>
+
+{% endblock %}
+{% block content %}
+
+
+<div class="container">
+    <h1 class="page-header">GeneWiki For {{ symbol }}</h1>
+    <p class="well"><strong>GeneWiki</strong> enables you to enrich the annotation of genes and transcripts.</p>
+
+    <h3>
+	<strong>GeneNetwork</strong>
+	<span class="badge">
+	    {{ entries.gn_entries|length if entries.gn_entries[0] else 0 }}
+	</span>:
+    </h3>
+    {% if entries.gn_entries[0] %}
+    <ul class="list-group">
+	{% for entry in entries.gn_entries %}
+	<li class="list-group-item">
+	    <details>
+		<summary>
+		    {{ entry["entry"]["value"] }}
+		    {% if entry.get("weburl") %}
+		    <sup><small><a href="{{ entry.weburl.value }}" target="_blank"><span class="glyphicon glyphicon-globe" aria-hidden="true"></span> web</a></small></sup>
+		    {% endif %}
+		</summary>
+		<dl class="dl-horizontal">
+		    <dt>Author:</dt>
+		    <dd>{{ entry["author"]["value"] }}</dd>
+
+		    {% if entry.get("geneCategory") %}
+		    <dt>Category:</dt>
+		    <dd>{{ entry["geneCategory"]["value"]}}</dd>
+		    {% endif %}
+
+		    <dt>Add Time:</dt>
+		    <dd>{{ entry["created"]["value"]}}</dd>
+		</dl>
+	    </details>
+	</li>
+	{% endfor %}
+    </ul>
+
+    {% else %}
+
+    <p class="well"><u>There are no GeneNetwork entries for <b>{{ symbol }}.</b></u></p>
+
+    {% endif %}
+
+    <h3>
+	<strong>GeneRIF from NCBI</strong>
+	<span class="badge">
+	    {{ entries.ncbi_entries|length if entries.ncbi_entries[0] else 0 }}
+	</span>:
+    </h3>
+    {% if entries.ncbi_entries[0] %}
+	<ol>
+	{% for entry in entries.ncbi_entries %}
+	<li>
+	    {{ entry.entry.value }}
+	    (<a href="{{ entry['generif']['value'] }}" target="_blank">{{ entry["speciesBinomialName"]["value"] }}</a>)
+            {% if entry.PubMedId.value != "" %}
+	    {% set pmids = entry.PubMedId.value.split(",") %}
+	    (PubMed: {% for id in pmids %} <a href="http://rdf.ncbi.nlm.nih.gov/pubmed/{{ id }}" target="_blank">{{ id }}</a>{% endfor %})
+	    <sup><small><em>{{ entry.createdOn.value }}</em></small></sup>
+	    {% endif %}
+	</li>
+	{% endfor %}
+    </ol>
+    {% else %}
+    <p class="well"><u>There are no NCBI entries for <b>{{ symbol }}.</b></u></p>
+    {% endif %}
+</div>
+{% endblock %}
diff --git a/gn2/wqflask/views.py b/gn2/wqflask/views.py
index 2442da03..9346c22b 100644
--- a/gn2/wqflask/views.py
+++ b/gn2/wqflask/views.py
@@ -1221,7 +1221,7 @@ def display_diffs_users():
 
 
 @app.route("/genewiki/<symbol>")
-def display_generif_page(symbol):
+def display_genewiki_page(symbol):
     """Fetch GeneRIF metadata from GN3 and display it"""
     entries = requests.get(
         urljoin(
@@ -1230,7 +1230,7 @@ def display_generif_page(symbol):
         )
     ).json()
     return render_template(
-        "generif.html",
+        "genewiki.html",
         symbol=symbol,
         entries=entries
     )
-- 
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