From a2dba7af9613a827d2975b9d322d4eefc5659b4e Mon Sep 17 00:00:00 2001
From: zsloan
Date: Tue, 18 Feb 2020 11:39:45 -0600
Subject: Added log10 transform

Fixed Y axis for bar chart and histogram, so it doesn't change when you zoom in or out
---
 wqflask/wqflask/static/new/javascript/show_trait.js  | 20 ++++++++++++++++++--
 .../templates/show_trait_transform_and_filter.html   |  1 +
 2 files changed, 19 insertions(+), 2 deletions(-)

diff --git a/wqflask/wqflask/static/new/javascript/show_trait.js b/wqflask/wqflask/static/new/javascript/show_trait.js
index 96b7c305..819c4d12 100644
--- a/wqflask/wqflask/static/new/javascript/show_trait.js
+++ b/wqflask/wqflask/static/new/javascript/show_trait.js
@@ -569,6 +569,20 @@ block_by_index = function() {
   _ref = index_string.split(",");
   for (_i = 0, _len = _ref.length; _i < _len; _i++) {
     index_set = _ref[_i];
+    /*
+    if (index_set.indexOf('<') !== -1) {
+      try {
+        start_index = parseInt(index_set.split("<")[0]);
+        end_index = parseInt(index_set.split("<")[1]);
+        for (index = _j = start_index; start_index <= end_index ? _j <= end_index : _j >= end_index; index = start_index <= end_index ? ++_j : --_j) {
+          index_list.push(index);
+        }
+      } catch (_error) {
+        error = _error;
+        alert("Syntax error");
+      }
+    }
+    */
     if (index_set.indexOf('-') !== -1) {
       try {
         start_index = parseInt(index_set.split("-")[0]);
@@ -1041,7 +1055,8 @@ if (js_data.num_values < 256) {
         tickfont: {
           size: 16
         },
-        tickformat: tick_digits
+        tickformat: tick_digits,
+        fixedrange: true
     },
     width: bar_chart_width,
     height: 600,
@@ -1096,7 +1111,8 @@ root.histogram_layout = {
            tickfont: {
              size: 16
            },
-           automargin: true
+           automargin: true,
+           fixedrange: true
          },
   width: 500,
   height: 600,
diff --git a/wqflask/wqflask/templates/show_trait_transform_and_filter.html b/wqflask/wqflask/templates/show_trait_transform_and_filter.html
index fbdebcd0..4be6d249 100644
--- a/wqflask/wqflask/templates/show_trait_transform_and_filter.html
+++ b/wqflask/wqflask/templates/show_trait_transform_and_filter.html
@@ -52,6 +52,7 @@
               <select id="norm_method" class="select optional span2">
                 {% if negative_vals_exist == "false" %}
                 <option value="log2">Log2</option>
+                <option value="log10">Log10</option>
                 {% endif %}
                 <option value="zscore">Z-score</option>
                 <option value="qnorm">Quantile</option>
-- 
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