From 9151fcb17c8d72e36bb11296e123d6d107410dc2 Mon Sep 17 00:00:00 2001
From: zsloan
Date: Fri, 20 Sep 2019 13:14:21 -0500
Subject: Fixed issue where remapping or zooming in didn't work for temp/PCA
 traits

---
 wqflask/wqflask/marker_regression/display_mapping_results.py | 6 +++++-
 1 file changed, 5 insertions(+), 1 deletion(-)

diff --git a/wqflask/wqflask/marker_regression/display_mapping_results.py b/wqflask/wqflask/marker_regression/display_mapping_results.py
index 2834f1c3..ef0cfdc5 100644
--- a/wqflask/wqflask/marker_regression/display_mapping_results.py
+++ b/wqflask/wqflask/marker_regression/display_mapping_results.py
@@ -159,6 +159,10 @@ class DisplayMappingResults(object):
         if 'first_run' in start_vars:
             self.first_run = start_vars['first_run']
 
+        if 'temp_trait' in start_vars:
+            self.temp_trait = "True"
+            self.group = start_vars['group']
+
         #Needing for form submission when doing single chr mapping or remapping after changing options
         self.samples = start_vars['samples']
         self.vals = start_vars['vals']
@@ -2074,8 +2078,8 @@ class DisplayMappingResults(object):
         else:
             perm_output = self.perm_output
 
-        Plot.plotBar(myCanvas, perm_output, XLabel=self.LRS_LOD, YLabel='Frequency', title=' Histogram of Permutation Test')
         filename= webqtlUtil.genRandStr("Reg_")
+        Plot.plotBar(myCanvas, perm_output, XLabel=self.LRS_LOD, YLabel='Frequency', title=' Histogram of Permutation Test')
         myCanvas.save(GENERATED_IMAGE_DIR+filename, format='gif')
 
         return filename
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